Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
XRCC1P18887 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
XRCC1P18887 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 KRASP1-201ENST00000407852 552 ntBASIC19.4■□□□□ 0.7
XRCC1P18887 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.4■□□□□ 0.7
XRCC1P18887 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.4■□□□□ 0.7
XRCC1P18887 AL121906.2-201ENST00000621597 723 ntBASIC19.4■□□□□ 0.7
XRCC1P18887 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.4■□□□□ 0.7
XRCC1P18887 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.4■□□□□ 0.7
XRCC1P18887 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.4■□□□□ 0.7
XRCC1P18887 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
XRCC1P18887 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
XRCC1P18887 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC1P18887 AC005332.7-201ENST00000614046 2005 ntBASIC19.39■□□□□ 0.69
XRCC1P18887 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.39■□□□□ 0.69
XRCC1P18887 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.39■□□□□ 0.69
XRCC1P18887 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.39■□□□□ 0.69
XRCC1P18887 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.39■□□□□ 0.69
XRCC1P18887 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC1P18887 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
XRCC1P18887 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC1P18887 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC1P18887 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
XRCC1P18887 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
XRCC1P18887 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC1P18887 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
XRCC1P18887 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.39■□□□□ 0.69
XRCC1P18887 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC1P18887 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC1P18887 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.38■□□□□ 0.69
XRCC1P18887 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC1P18887 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.38■□□□□ 0.69
XRCC1P18887 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
XRCC1P18887 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.37■□□□□ 0.69
XRCC1P18887 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
XRCC1P18887 MIR718-201ENST00000390190 70 ntBASIC19.37■□□□□ 0.69
XRCC1P18887 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.37■□□□□ 0.69
XRCC1P18887 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.37■□□□□ 0.69
XRCC1P18887 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.37■□□□□ 0.69
XRCC1P18887 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.37■□□□□ 0.69
XRCC1P18887 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
XRCC1P18887 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
XRCC1P18887 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.37■□□□□ 0.69
XRCC1P18887 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
XRCC1P18887 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms