Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
CCDC130P13994 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC130P13994 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC130P13994 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC130P13994 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC130P13994 CD177P1-201ENST00000606252 935 ntBASIC20.65■□□□□ 0.9
CCDC130P13994 AC073195.1-201ENST00000607241 877 ntBASIC20.65■□□□□ 0.9
CCDC130P13994 HLA-A-209ENST00000638375 975 ntBASIC20.65■□□□□ 0.9
CCDC130P13994 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC130P13994 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC130P13994 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC130P13994 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC130P13994 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC130P13994 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC130P13994 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC130P13994 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC130P13994 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC130P13994 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC130P13994 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC130P13994 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC130P13994 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC130P13994 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC130P13994 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC130P13994 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC130P13994 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC130P13994 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC130P13994 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC130P13994 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC130P13994 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC130P13994 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC130P13994 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC130P13994 CR392000.1-201ENST00000624770 1228 ntBASIC20.64■□□□□ 0.89
CCDC130P13994 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC130P13994 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC130P13994 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC130P13994 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC130P13994 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC130P13994 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC130P13994 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC130P13994 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC130P13994 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC130P13994 LINC01465-201ENST00000408887 1940 ntBASIC20.63■□□□□ 0.89
CCDC130P13994 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC130P13994 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC130P13994 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC130P13994 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CCDC130P13994 MIR4497-201ENST00000583208 89 ntBASIC20.63■□□□□ 0.89
CCDC130P13994 AP001412.1-201ENST00000608405 714 ntBASIC20.63■□□□□ 0.89
CCDC130P13994 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC130P13994 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC130P13994 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
CCDC130P13994 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC130P13994 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC130P13994 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC130P13994 TREX1-205ENST00000625293 1783 ntBASIC20.62■□□□□ 0.89
CCDC130P13994 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 RNF165-205ENST00000588679 2904 ntBASIC20.62■□□□□ 0.89
CCDC130P13994 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
CCDC130P13994 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC130P13994 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC130P13994 KSR1P1-201ENST00000446298 240 ntBASIC20.62■□□□□ 0.89
CCDC130P13994 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC130P13994 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC130P13994 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC130P13994 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC130P13994 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC130P13994 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC130P13994 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC130P13994 AL158211.5-201ENST00000623583 2518 ntBASIC20.62■□□□□ 0.89
CCDC130P13994 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC130P13994 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC130P13994 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC130P13994 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC130P13994 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC130P13994 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC130P13994 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC130P13994 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC130P13994 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC130P13994 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC130P13994 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC130P13994 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC130P13994 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC130P13994 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC130P13994 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms