Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC172P0C7W6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC172P0C7W6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC172P0C7W6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC172P0C7W6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC172P0C7W6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC172P0C7W6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC172P0C7W6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC172P0C7W6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC172P0C7W6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 AL032819.2-201ENST00000624543 2162 ntBASIC21.01■□□□□ 0.95
CCDC172P0C7W6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC172P0C7W6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC172P0C7W6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21■□□□□ 0.95
CCDC172P0C7W6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21■□□□□ 0.95
CCDC172P0C7W6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21■□□□□ 0.95
CCDC172P0C7W6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21■□□□□ 0.95
CCDC172P0C7W6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC172P0C7W6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.99■□□□□ 0.95
CCDC172P0C7W6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC172P0C7W6 AC120498.9-201ENST00000339021 3867 ntBASIC20.99■□□□□ 0.95
CCDC172P0C7W6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 NCF1B-203ENST00000435988 1254 ntBASIC20.98■□□□□ 0.95
CCDC172P0C7W6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 AC097658.1-201ENST00000475555 843 ntBASIC20.98■□□□□ 0.95
CCDC172P0C7W6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms