Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGB1P09429 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.98■■□□□ 1.27
HMGB1P09429 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGB1P09429 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
HMGB1P09429 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
HMGB1P09429 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HMGB1P09429 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.97■■□□□ 1.27
HMGB1P09429 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.97■■□□□ 1.27
HMGB1P09429 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.97■■□□□ 1.27
HMGB1P09429 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.97■■□□□ 1.27
HMGB1P09429 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.97■■□□□ 1.27
HMGB1P09429 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
HMGB1P09429 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HMGB1P09429 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
HMGB1P09429 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
HMGB1P09429 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
HMGB1P09429 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.96■■□□□ 1.27
HMGB1P09429 AC233263.1-201ENST00000578059 224 ntBASIC22.96■■□□□ 1.27
HMGB1P09429 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
HMGB1P09429 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
HMGB1P09429 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
HMGB1P09429 AC104417.2-201ENST00000562989 1793 ntBASIC22.96■■□□□ 1.27
HMGB1P09429 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.96■■□□□ 1.27
HMGB1P09429 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.96■■□□□ 1.27
HMGB1P09429 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGB1P09429 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.27
HMGB1P09429 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.27
HMGB1P09429 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGB1P09429 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
HMGB1P09429 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGB1P09429 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HMGB1P09429 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGB1P09429 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.95■■□□□ 1.26
HMGB1P09429 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HMGB1P09429 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
HMGB1P09429 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGB1P09429 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.95■■□□□ 1.26
HMGB1P09429 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.94■■□□□ 1.26
HMGB1P09429 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
HMGB1P09429 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.94■■□□□ 1.26
HMGB1P09429 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
HMGB1P09429 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
HMGB1P09429 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
HMGB1P09429 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
HMGB1P09429 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
HMGB1P09429 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.94■■□□□ 1.26
HMGB1P09429 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
HMGB1P09429 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGB1P09429 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.93■■□□□ 1.26
HMGB1P09429 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.93■■□□□ 1.26
HMGB1P09429 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.93■■□□□ 1.26
HMGB1P09429 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
HMGB1P09429 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
HMGB1P09429 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
HMGB1P09429 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.93■■□□□ 1.26
HMGB1P09429 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.93■■□□□ 1.26
HMGB1P09429 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.93■■□□□ 1.26
HMGB1P09429 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGB1P09429 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.93■■□□□ 1.26
HMGB1P09429 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms