Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.18■□□□□ 0.82
CD48P09326 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CD48P09326 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.18■□□□□ 0.82
CD48P09326 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.18■□□□□ 0.82
CD48P09326 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.18■□□□□ 0.82
CD48P09326 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.18■□□□□ 0.82
CD48P09326 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD48P09326 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
CD48P09326 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.17■□□□□ 0.82
CD48P09326 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 ZNF815P-204ENST00000434898 1737 ntBASIC20.17■□□□□ 0.82
CD48P09326 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CD48P09326 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.17■□□□□ 0.82
CD48P09326 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.17■□□□□ 0.82
CD48P09326 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.17■□□□□ 0.82
CD48P09326 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD48P09326 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.17■□□□□ 0.82
CD48P09326 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
CD48P09326 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 AC026366.1-201ENST00000488803 879 ntBASIC20.16■□□□□ 0.82
CD48P09326 KRT18P16-201ENST00000510337 1294 ntBASIC20.16■□□□□ 0.82
CD48P09326 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.16■□□□□ 0.82
CD48P09326 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CD48P09326 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CD48P09326 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD48P09326 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.16■□□□□ 0.82
CD48P09326 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.15■□□□□ 0.82
CD48P09326 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CD48P09326 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.15■□□□□ 0.82
CD48P09326 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.15■□□□□ 0.82
CD48P09326 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.15■□□□□ 0.82
CD48P09326 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.15■□□□□ 0.82
CD48P09326 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 KRT8P8-201ENST00000434750 1448 ntBASIC20.15■□□□□ 0.82
CD48P09326 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CD48P09326 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.15■□□□□ 0.82
CD48P09326 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD48P09326 SDHAP1-207ENST00000440850 2000 ntBASIC20.15■□□□□ 0.82
CD48P09326 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.15■□□□□ 0.82
CD48P09326 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CD48P09326 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
CD48P09326 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.14■□□□□ 0.82
CD48P09326 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms