Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
APOA4P06727 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.49■□□□□ 0.71
APOA4P06727 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
APOA4P06727 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOA4P06727 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 RPS2P52-201ENST00000469610 820 ntBASIC19.48■□□□□ 0.71
APOA4P06727 UNC93B4-201ENST00000505679 747 ntBASIC19.48■□□□□ 0.71
APOA4P06727 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.48■□□□□ 0.71
APOA4P06727 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.48■□□□□ 0.71
APOA4P06727 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
APOA4P06727 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOA4P06727 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
APOA4P06727 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.48■□□□□ 0.71
APOA4P06727 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.47■□□□□ 0.71
APOA4P06727 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 AC008687.6-201ENST00000596318 630 ntBASIC19.47■□□□□ 0.71
APOA4P06727 AC120498.8-201ENST00000614275 531 ntBASIC19.47■□□□□ 0.71
APOA4P06727 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.47■□□□□ 0.71
APOA4P06727 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.47■□□□□ 0.71
APOA4P06727 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.47■□□□□ 0.71
APOA4P06727 LINC01465-201ENST00000408887 1940 ntBASIC19.47■□□□□ 0.71
APOA4P06727 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOA4P06727 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.46■□□□□ 0.71
APOA4P06727 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.46■□□□□ 0.71
APOA4P06727 AC004408.2-201ENST00000623613 2777 ntBASIC19.46■□□□□ 0.71
APOA4P06727 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
APOA4P06727 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
APOA4P06727 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
APOA4P06727 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.46■□□□□ 0.71
APOA4P06727 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.46■□□□□ 0.71
APOA4P06727 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.46■□□□□ 0.71
APOA4P06727 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.46■□□□□ 0.71
APOA4P06727 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.46■□□□□ 0.71
APOA4P06727 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APOA4P06727 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms