Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC022517.1-201ENST00000592429 346 ntBASIC18.18■□□□□ 0.5
OPN1SWP03999 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.18■□□□□ 0.5
OPN1SWP03999 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.18■□□□□ 0.5
OPN1SWP03999 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.18■□□□□ 0.5
OPN1SWP03999 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.18■□□□□ 0.5
OPN1SWP03999 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
OPN1SWP03999 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.17■□□□□ 0.5
OPN1SWP03999 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.17■□□□□ 0.5
OPN1SWP03999 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
OPN1SWP03999 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.17■□□□□ 0.5
OPN1SWP03999 MIR5787-201ENST00000611784 55 ntBASIC18.17■□□□□ 0.5
OPN1SWP03999 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.17■□□□□ 0.5
OPN1SWP03999 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPN1SWP03999 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.17■□□□□ 0.5
OPN1SWP03999 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.17■□□□□ 0.5
OPN1SWP03999 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
OPN1SWP03999 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
OPN1SWP03999 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
OPN1SWP03999 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.16■□□□□ 0.5
OPN1SWP03999 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
OPN1SWP03999 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
OPN1SWP03999 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
OPN1SWP03999 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 AL049812.1-201ENST00000432563 2267 ntBASIC18.16■□□□□ 0.5
OPN1SWP03999 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.16■□□□□ 0.5
OPN1SWP03999 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1SWP03999 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
OPN1SWP03999 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 NEFHP1-201ENST00000412845 2629 ntBASIC18.15■□□□□ 0.5
OPN1SWP03999 MKRN4P-201ENST00000444706 1521 ntBASIC18.15■□□□□ 0.5
OPN1SWP03999 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
OPN1SWP03999 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
OPN1SWP03999 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.15■□□□□ 0.5
OPN1SWP03999 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.15■□□□□ 0.5
OPN1SWP03999 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.15■□□□□ 0.5
OPN1SWP03999 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.15■□□□□ 0.5
OPN1SWP03999 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.15■□□□□ 0.5
OPN1SWP03999 AL050303.2-201ENST00000619798 666 ntBASIC18.15■□□□□ 0.5
OPN1SWP03999 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
OPN1SWP03999 AL161938.1-201ENST00000569833 2180 ntBASIC18.15■□□□□ 0.5
OPN1SWP03999 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.15■□□□□ 0.5
OPN1SWP03999 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1SWP03999 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
OPN1SWP03999 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.14■□□□□ 0.49
OPN1SWP03999 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
OPN1SWP03999 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.14■□□□□ 0.49
OPN1SWP03999 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1SWP03999 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms