Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRP01130 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.76■□□□□ 0.59
LDLRP01130 AC211429.1-201ENST00000415277 523 ntBASIC18.76■□□□□ 0.59
LDLRP01130 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRP01130 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.76■□□□□ 0.59
LDLRP01130 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.76■□□□□ 0.59
LDLRP01130 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LDLRP01130 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LDLRP01130 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRP01130 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRP01130 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRP01130 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LDLRP01130 AC116050.2-201ENST00000612102 1779 ntBASIC18.76■□□□□ 0.59
LDLRP01130 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
LDLRP01130 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.75■□□□□ 0.59
LDLRP01130 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LDLRP01130 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.75■□□□□ 0.59
LDLRP01130 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.75■□□□□ 0.59
LDLRP01130 AL591742.1-201ENST00000604433 565 ntBASIC18.75■□□□□ 0.59
LDLRP01130 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.75■□□□□ 0.59
LDLRP01130 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.75■□□□□ 0.59
LDLRP01130 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.75■□□□□ 0.59
LDLRP01130 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LDLRP01130 AC020763.4-201ENST00000623414 4170 ntBASIC18.75■□□□□ 0.59
LDLRP01130 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
LDLRP01130 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
LDLRP01130 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRP01130 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
LDLRP01130 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LDLRP01130 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
LDLRP01130 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.74■□□□□ 0.59
LDLRP01130 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LDLRP01130 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.74■□□□□ 0.59
LDLRP01130 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.74■□□□□ 0.59
LDLRP01130 AC008403.3-201ENST00000598924 454 ntBASIC18.74■□□□□ 0.59
LDLRP01130 REXO1L12P-201ENST00000622156 912 ntBASIC18.74■□□□□ 0.59
LDLRP01130 FAM197Y4-202ENST00000622692 608 ntBASIC18.74■□□□□ 0.59
LDLRP01130 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LDLRP01130 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.74■□□□□ 0.59
LDLRP01130 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LDLRP01130 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRP01130 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRP01130 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
LDLRP01130 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LDLRP01130 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.73■□□□□ 0.59
LDLRP01130 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.73■□□□□ 0.59
LDLRP01130 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.73■□□□□ 0.59
LDLRP01130 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.73■□□□□ 0.59
LDLRP01130 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LDLRP01130 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.73■□□□□ 0.59
LDLRP01130 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LDLRP01130 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRP01130 NEFHP1-201ENST00000412845 2629 ntBASIC18.72■□□□□ 0.59
LDLRP01130 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRP01130 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms