Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.22■□□□□ 0.03
TOMM40O96008 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.22■□□□□ 0.03
TOMM40O96008 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.22■□□□□ 0.03
TOMM40O96008 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.22■□□□□ 0.03
TOMM40O96008 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 AC080038.1-201ENST00000611274 1154 ntBASIC15.22■□□□□ 0.03
TOMM40O96008 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.22■□□□□ 0.03
TOMM40O96008 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 AC116351.2-201ENST00000606540 1585 ntBASIC15.22■□□□□ 0.03
TOMM40O96008 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.22■□□□□ 0.03
TOMM40O96008 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TOMM40O96008 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TOMM40O96008 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TOMM40O96008 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.21■□□□□ 0.03
TOMM40O96008 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 AL032819.2-201ENST00000624543 2162 ntBASIC15.21■□□□□ 0.03
TOMM40O96008 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 AF201337.1-201ENST00000520239 748 ntBASIC15.21■□□□□ 0.03
TOMM40O96008 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 AC105036.2-201ENST00000569468 176 ntBASIC15.21■□□□□ 0.03
TOMM40O96008 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TOMM40O96008 AC073111.5-205ENST00000641717 521 ntBASIC15.21■□□□□ 0.03
TOMM40O96008 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TOMM40O96008 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.21■□□□□ 0.03
TOMM40O96008 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TOMM40O96008 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.21■□□□□ 0.03
TOMM40O96008 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TOMM40O96008 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TOMM40O96008 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TOMM40O96008 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TOMM40O96008 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.2■□□□□ 0.02
TOMM40O96008 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.2■□□□□ 0.02
TOMM40O96008 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
TOMM40O96008 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TOMM40O96008 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TOMM40O96008 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.2■□□□□ 0.02
TOMM40O96008 AL390719.1-204ENST00000412397 1219 ntBASIC15.2■□□□□ 0.02
TOMM40O96008 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.2■□□□□ 0.02
TOMM40O96008 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.2■□□□□ 0.02
TOMM40O96008 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.2■□□□□ 0.02
TOMM40O96008 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.2■□□□□ 0.02
TOMM40O96008 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.2■□□□□ 0.02
TOMM40O96008 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.2■□□□□ 0.02
TOMM40O96008 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.2■□□□□ 0.02
TOMM40O96008 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.2■□□□□ 0.02
TOMM40O96008 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TOMM40O96008 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TOMM40O96008 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.19■□□□□ 0.02
TOMM40O96008 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.19■□□□□ 0.02
TOMM40O96008 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TOMM40O96008 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TOMM40O96008 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.19■□□□□ 0.02
TOMM40O96008 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.19■□□□□ 0.02
TOMM40O96008 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TOMM40O96008 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.19■□□□□ 0.02
TOMM40O96008 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TOMM40O96008 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms