Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN1O95832 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN1O95832 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 AC073130.3-201ENST00000624389 2278 ntBASIC17.37■□□□□ 0.37
CLDN1O95832 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.37■□□□□ 0.37
CLDN1O95832 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN1O95832 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN1O95832 AC011558.1-201ENST00000623459 338 ntBASIC17.37■□□□□ 0.37
CLDN1O95832 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLDN1O95832 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN1O95832 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN1O95832 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CLDN1O95832 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN1O95832 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN1O95832 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN1O95832 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN1O95832 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN1O95832 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 C1QL1P1-201ENST00000568105 661 ntBASIC17.36■□□□□ 0.37
CLDN1O95832 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.36■□□□□ 0.37
CLDN1O95832 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN1O95832 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN1O95832 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN1O95832 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN1O95832 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN1O95832 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN1O95832 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN1O95832 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN1O95832 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN1O95832 AC246785.2-201ENST00000432512 513 ntBASIC17.35■□□□□ 0.37
CLDN1O95832 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN1O95832 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN1O95832 SLC25A1P4-201ENST00000567977 778 ntBASIC17.35■□□□□ 0.37
CLDN1O95832 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN1O95832 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN1O95832 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN1O95832 AC005332.1-201ENST00000577698 1310 ntBASIC17.35■□□□□ 0.37
CLDN1O95832 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN1O95832 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CLDN1O95832 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN1O95832 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN1O95832 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN1O95832 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN1O95832 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN1O95832 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN1O95832 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN1O95832 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN1O95832 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN1O95832 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN1O95832 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN1O95832 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN1O95832 AL671277.2-201ENST00000458060 996 ntBASIC17.34■□□□□ 0.37
CLDN1O95832 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN1O95832 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms