Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.88■■□□□ 1.09
GGPS1O95749 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
GGPS1O95749 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 KRT18P57-201ENST00000443599 1254 ntBASIC21.88■■□□□ 1.09
GGPS1O95749 SLC25A3P1-201ENST00000443844 931 ntBASIC21.88■■□□□ 1.09
GGPS1O95749 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.88■■□□□ 1.09
GGPS1O95749 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
GGPS1O95749 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
GGPS1O95749 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.88■■□□□ 1.09
GGPS1O95749 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
GGPS1O95749 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.87■■□□□ 1.09
GGPS1O95749 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.87■■□□□ 1.09
GGPS1O95749 Z85996.1-201ENST00000494644 937 ntBASIC21.87■■□□□ 1.09
GGPS1O95749 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.87■■□□□ 1.09
GGPS1O95749 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.87■■□□□ 1.09
GGPS1O95749 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.87■■□□□ 1.09
GGPS1O95749 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GGPS1O95749 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 TERF1P1-201ENST00000311003 1181 ntBASIC21.86■■□□□ 1.09
GGPS1O95749 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.86■■□□□ 1.09
GGPS1O95749 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.86■■□□□ 1.09
GGPS1O95749 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
GGPS1O95749 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.86■■□□□ 1.09
GGPS1O95749 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
GGPS1O95749 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
GGPS1O95749 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GGPS1O95749 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
GGPS1O95749 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.85■■□□□ 1.09
GGPS1O95749 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
GGPS1O95749 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 AL137013.1-201ENST00000432946 1228 ntBASIC21.85■■□□□ 1.09
GGPS1O95749 FAM207BP-201ENST00000447172 505 ntBASIC21.85■■□□□ 1.09
GGPS1O95749 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.85■■□□□ 1.09
GGPS1O95749 AC091390.4-202ENST00000476426 537 ntBASIC21.85■■□□□ 1.09
GGPS1O95749 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
GGPS1O95749 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
GGPS1O95749 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GGPS1O95749 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.85■■□□□ 1.09
GGPS1O95749 AC009237.14-201ENST00000609975 1594 ntBASIC21.85■■□□□ 1.09
GGPS1O95749 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
GGPS1O95749 LINC01465-201ENST00000408887 1940 ntBASIC21.84■■□□□ 1.09
GGPS1O95749 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.84■■□□□ 1.09
GGPS1O95749 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.84■■□□□ 1.09
GGPS1O95749 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.84■■□□□ 1.09
GGPS1O95749 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GGPS1O95749 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GGPS1O95749 TSPY14P-201ENST00000303979 915 ntBASIC21.84■■□□□ 1.09
GGPS1O95749 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GGPS1O95749 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.84■■□□□ 1.09
GGPS1O95749 EGLN1P1-201ENST00000531623 762 ntBASIC21.84■■□□□ 1.09
GGPS1O95749 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GGPS1O95749 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.84■■□□□ 1.09
GGPS1O95749 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.84■■□□□ 1.09
GGPS1O95749 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
GGPS1O95749 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
GGPS1O95749 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms