Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.65■■□□□ 1.22
CDKL5O76039 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CDKL5O76039 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDKL5O76039 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDKL5O76039 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDKL5O76039 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDKL5O76039 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.64■■□□□ 1.22
CDKL5O76039 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.64■■□□□ 1.22
CDKL5O76039 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CDKL5O76039 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.64■■□□□ 1.22
CDKL5O76039 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDKL5O76039 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CDKL5O76039 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.64■■□□□ 1.21
CDKL5O76039 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.64■■□□□ 1.21
CDKL5O76039 CD99P1-205ENST00000527459 561 ntBASIC22.64■■□□□ 1.21
CDKL5O76039 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.64■■□□□ 1.21
CDKL5O76039 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.64■■□□□ 1.21
CDKL5O76039 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKL5O76039 ZNF815P-204ENST00000434898 1737 ntBASIC22.64■■□□□ 1.21
CDKL5O76039 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKL5O76039 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CDKL5O76039 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDKL5O76039 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKL5O76039 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.63■■□□□ 1.21
CDKL5O76039 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.63■■□□□ 1.21
CDKL5O76039 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 NBPF21P-201ENST00000425093 1451 ntBASIC22.63■■□□□ 1.21
CDKL5O76039 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.63■■□□□ 1.21
CDKL5O76039 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.63■■□□□ 1.21
CDKL5O76039 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CDKL5O76039 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDKL5O76039 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.63■■□□□ 1.21
CDKL5O76039 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.62■■□□□ 1.21
CDKL5O76039 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.62■■□□□ 1.21
CDKL5O76039 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.62■■□□□ 1.21
CDKL5O76039 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.62■■□□□ 1.21
CDKL5O76039 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.62■■□□□ 1.21
CDKL5O76039 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.62■■□□□ 1.21
CDKL5O76039 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.62■■□□□ 1.21
CDKL5O76039 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CDKL5O76039 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.62■■□□□ 1.21
CDKL5O76039 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CDKL5O76039 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDKL5O76039 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.61■■□□□ 1.21
CDKL5O76039 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.61■■□□□ 1.21
CDKL5O76039 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.61■■□□□ 1.21
CDKL5O76039 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.61■■□□□ 1.21
CDKL5O76039 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CDKL5O76039 AC004264.1-201ENST00000608354 794 ntBASIC22.61■■□□□ 1.21
CDKL5O76039 AL032819.2-201ENST00000624543 2162 ntBASIC22.61■■□□□ 1.21
CDKL5O76039 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.61■■□□□ 1.21
CDKL5O76039 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDKL5O76039 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDKL5O76039 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDKL5O76039 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDKL5O76039 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDKL5O76039 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDKL5O76039 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.6■■□□□ 1.21
CDKL5O76039 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDKL5O76039 AC233263.1-201ENST00000578059 224 ntBASIC22.6■■□□□ 1.21
CDKL5O76039 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.6■■□□□ 1.21
CDKL5O76039 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms