Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.4■□□□□ 0.54
URB1O60287 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
URB1O60287 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 YBX1P10-201ENST00000444752 975 ntBASIC18.4■□□□□ 0.54
URB1O60287 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.4■□□□□ 0.54
URB1O60287 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.4■□□□□ 0.54
URB1O60287 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
URB1O60287 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
URB1O60287 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
URB1O60287 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
URB1O60287 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
URB1O60287 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
URB1O60287 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
URB1O60287 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
URB1O60287 AC004980.1-204ENST00000429707 299 ntBASIC18.39■□□□□ 0.54
URB1O60287 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.39■□□□□ 0.54
URB1O60287 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
URB1O60287 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
URB1O60287 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.39■□□□□ 0.53
URB1O60287 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
URB1O60287 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.39■□□□□ 0.53
URB1O60287 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.39■□□□□ 0.53
URB1O60287 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.39■□□□□ 0.53
URB1O60287 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.39■□□□□ 0.53
URB1O60287 AC011298.2-201ENST00000617989 482 ntBASIC18.39■□□□□ 0.53
URB1O60287 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.39■□□□□ 0.53
URB1O60287 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
URB1O60287 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.39■□□□□ 0.53
URB1O60287 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
URB1O60287 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.38■□□□□ 0.53
URB1O60287 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
URB1O60287 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.38■□□□□ 0.53
URB1O60287 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
URB1O60287 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.38■□□□□ 0.53
URB1O60287 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
URB1O60287 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
URB1O60287 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
URB1O60287 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
URB1O60287 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.38■□□□□ 0.53
URB1O60287 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
URB1O60287 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.37■□□□□ 0.53
URB1O60287 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
URB1O60287 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
URB1O60287 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.37■□□□□ 0.53
URB1O60287 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.37■□□□□ 0.53
URB1O60287 UNC93B7-201ENST00000509439 705 ntBASIC18.37■□□□□ 0.53
URB1O60287 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.37■□□□□ 0.53
URB1O60287 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 AL024507.2-201ENST00000606070 2574 ntBASIC18.37■□□□□ 0.53
URB1O60287 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
URB1O60287 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
URB1O60287 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
URB1O60287 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
URB1O60287 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
URB1O60287 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.37■□□□□ 0.53
URB1O60287 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
URB1O60287 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.36■□□□□ 0.53
URB1O60287 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.36■□□□□ 0.53
URB1O60287 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.36■□□□□ 0.53
URB1O60287 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
URB1O60287 AL845331.1-201ENST00000424978 1190 ntBASIC18.36■□□□□ 0.53
URB1O60287 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.36■□□□□ 0.53
URB1O60287 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
URB1O60287 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms