Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSNA1O43805 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSNA1O43805 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSNA1O43805 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.58■□□□□ 0.25
SSNA1O43805 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.58■□□□□ 0.24
SSNA1O43805 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SSNA1O43805 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.58■□□□□ 0.24
SSNA1O43805 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 NTF6A-201ENST00000591175 560 ntBASIC16.58■□□□□ 0.24
SSNA1O43805 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.58■□□□□ 0.24
SSNA1O43805 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.58■□□□□ 0.24
SSNA1O43805 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.58■□□□□ 0.24
SSNA1O43805 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.58■□□□□ 0.24
SSNA1O43805 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.58■□□□□ 0.24
SSNA1O43805 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SSNA1O43805 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.58■□□□□ 0.24
SSNA1O43805 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.58■□□□□ 0.24
SSNA1O43805 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.58■□□□□ 0.24
SSNA1O43805 AC139713.2-201ENST00000641328 2723 ntBASIC16.58■□□□□ 0.24
SSNA1O43805 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSNA1O43805 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SSNA1O43805 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.57■□□□□ 0.24
SSNA1O43805 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.57■□□□□ 0.24
SSNA1O43805 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SSNA1O43805 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SSNA1O43805 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SSNA1O43805 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SSNA1O43805 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SSNA1O43805 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.57■□□□□ 0.24
SSNA1O43805 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SSNA1O43805 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.57■□□□□ 0.24
SSNA1O43805 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSNA1O43805 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.57■□□□□ 0.24
SSNA1O43805 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SSNA1O43805 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 SYT6-210ENST00000641643 1587 ntBASIC16.56■□□□□ 0.24
SSNA1O43805 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.56■□□□□ 0.24
SSNA1O43805 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.56■□□□□ 0.24
SSNA1O43805 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.56■□□□□ 0.24
SSNA1O43805 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 TSPY13P-201ENST00000338964 914 ntBASIC16.56■□□□□ 0.24
SSNA1O43805 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.56■□□□□ 0.24
SSNA1O43805 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.56■□□□□ 0.24
SSNA1O43805 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
SSNA1O43805 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SSNA1O43805 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.56■□□□□ 0.24
SSNA1O43805 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSNA1O43805 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSNA1O43805 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms