Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.29■□□□□ 0.68
TLR4O00206 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TLR4O00206 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
TLR4O00206 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.29■□□□□ 0.68
TLR4O00206 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.29■□□□□ 0.68
TLR4O00206 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.29■□□□□ 0.68
TLR4O00206 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.29■□□□□ 0.68
TLR4O00206 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.29■□□□□ 0.68
TLR4O00206 SLC25A1P4-201ENST00000567977 778 ntBASIC19.29■□□□□ 0.68
TLR4O00206 HLA-A-209ENST00000638375 975 ntBASIC19.29■□□□□ 0.68
TLR4O00206 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.29■□□□□ 0.68
TLR4O00206 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.29■□□□□ 0.68
TLR4O00206 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
TLR4O00206 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
TLR4O00206 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TLR4O00206 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TLR4O00206 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TLR4O00206 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.28■□□□□ 0.68
TLR4O00206 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TLR4O00206 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.28■□□□□ 0.68
TLR4O00206 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.28■□□□□ 0.68
TLR4O00206 ATP5G1P1-201ENST00000448724 379 ntBASIC19.28■□□□□ 0.68
TLR4O00206 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.28■□□□□ 0.68
TLR4O00206 ECEL1P2-202ENST00000465689 757 ntBASIC19.28■□□□□ 0.68
TLR4O00206 AC128688.1-201ENST00000487626 519 ntBASIC19.28■□□□□ 0.68
TLR4O00206 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.28■□□□□ 0.68
TLR4O00206 AC010203.1-204ENST00000548782 407 ntBASIC19.28■□□□□ 0.68
TLR4O00206 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.28■□□□□ 0.68
TLR4O00206 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.28■□□□□ 0.68
TLR4O00206 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.28■□□□□ 0.68
TLR4O00206 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.28■□□□□ 0.68
TLR4O00206 AP000692.2-201ENST00000608391 879 ntBASIC19.28■□□□□ 0.68
TLR4O00206 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.28■□□□□ 0.68
TLR4O00206 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TLR4O00206 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 RCC2P6-201ENST00000526625 1557 ntBASIC19.27■□□□□ 0.68
TLR4O00206 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TLR4O00206 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.27■□□□□ 0.68
TLR4O00206 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.27■□□□□ 0.68
TLR4O00206 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TLR4O00206 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 AC104076.2-201ENST00000448912 469 ntBASIC19.27■□□□□ 0.68
TLR4O00206 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
TLR4O00206 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.27■□□□□ 0.68
TLR4O00206 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.27■□□□□ 0.68
TLR4O00206 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 AC011298.2-201ENST00000617989 482 ntBASIC19.27■□□□□ 0.68
TLR4O00206 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.27■□□□□ 0.68
TLR4O00206 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TLR4O00206 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TLR4O00206 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TLR4O00206 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TLR4O00206 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TLR4O00206 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.27■□□□□ 0.67
TLR4O00206 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TLR4O00206 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.26■□□□□ 0.67
TLR4O00206 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 TMEM179-206ENST00000616017 1645 ntBASIC19.26■□□□□ 0.67
TLR4O00206 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms