Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC098934.4-201ENST00000564127 592 ntBASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 KRT8P8-201ENST00000434750 1448 ntBASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 UNC93B4-201ENST00000505679 747 ntBASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZNF815P-204ENST00000434898 1737 ntBASIC13.73□□□□□ -0.21
TRBV6-4A0A1B0GX49 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 HCG11-201ENST00000411553 5696 ntBASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-4A0A1B0GX49 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms