Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 AC124283.5-201ENST00000624661 1809 ntBASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 POU5F1P3-201ENST00000428824 1078 ntBASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 MTDHP1-201ENST00000605323 784 ntBASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV2A0A0B4J234 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV2A0A0B4J234 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV2A0A0B4J234 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 KRT18P16-201ENST00000510337 1294 ntBASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 AC004264.1-201ENST00000608354 794 ntBASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms