Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC069544.1-201ENST00000609399 999 ntBASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC018445.3-201ENST00000624177 1945 ntBASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.21■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 KRT8P8-201ENST00000434750 1448 ntBASIC17.21■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 SDHAP1-207ENST00000440850 2000 ntBASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 MTDHP1-201ENST00000605323 784 ntBASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 AC104417.2-201ENST00000562989 1793 ntBASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.18■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IGKV1D-43A0A0B4J1Z2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms