Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 AC092118.2-201ENST00000613495 667 ntBASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 LINC01465-201ENST00000408887 1940 ntBASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 SLC29A4P1-201ENST00000398760 971 ntBASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 GUSBP6-202ENST00000438529 1198 ntBASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV27A0A087WT01 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 AC093503.3-201ENST00000624917 2352 ntBASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV27A0A087WT01 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV27A0A087WT01 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 TSPY6P-201ENST00000448518 926 ntBASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 RPS2P52-201ENST00000469610 820 ntBASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms