Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 AL080317.3-201ENST00000607434 4315 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
HLA-CQ95604 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 RNU6-952P-201ENST00000391164 108 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 VDAC1P2-201ENST00000423609 850 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 RPL12P16-201ENST00000431098 498 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 RPS29P14-201ENST00000431518 171 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-CQ95604 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 AC007679.3-201ENST00000434035 414 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 SLC25A18P1-201ENST00000449385 454 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 U8.20-201ENST00000459445 131 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 RN7SL706P-201ENST00000460079 292 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 SLC25A51P1-201ENST00000468432 871 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 PFN1P6-201ENST00000476786 399 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 RPL32P9-201ENST00000487963 407 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 RPL7P51-201ENST00000490532 749 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 AC104109.1-201ENST00000498563 436 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-CQ95604 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 PTP4A1P4-201ENST00000512479 322 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-CQ95604 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-CQ95604 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.42□□□□□ -1.22
HLA-CQ95604 MIR3118-1-201ENST00000581787 76 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 uc_338.31-201ENST00000615595 186 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 AC025040.2-201ENST00000558657 1852 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-CQ95604 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC005034.3-201ENST00000604845 1747 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.41□□□□□ -1.22
HLA-CQ95604 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 AL359715.1-201ENST00000404330 555 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AL593856.1-201ENST00000419949 805 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AL583843.1-201ENST00000456070 346 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC108688.1-201ENST00000485817 713 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 MRPS35P2-201ENST00000508242 191 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 FAM206BP-201ENST00000510179 541 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC093303.1-201ENST00000514549 295 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 RNU4-29P-201ENST00000515943 174 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 SCARNA6-201ENST00000515982 265 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC123904.2-201ENST00000548059 300 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-CQ95604 APOOP1-201ENST00000604695 592 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC004908.1-201ENST00000606572 541 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC018690.1-201ENST00000608144 626 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC091953.2-201ENST00000623979 160 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms