Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 AC087565.3-203ENST00000641018 837 ntBASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 SNX18P3-202ENST00000565670 1750 ntBASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 AL445523.1-201ENST00000451184 1362 ntBASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNPOQ8N3V7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AP001541.1-201ENST00000623322 1904 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 RNU6-249P-201ENST00000363016 102 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 RNU6-553P-201ENST00000364047 96 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 HMGA1P8-201ENST00000414130 321 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 BOLA3P4-201ENST00000418151 400 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 NMD3P2-201ENST00000421815 761 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AL022331.1-201ENST00000429025 477 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC008072.1-201ENST00000434254 824 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ELOCP8-201ENST00000439309 332 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ACTR3P2-201ENST00000439585 1257 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ELOCP15-201ENST00000442090 332 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 RAB11AP1-201ENST00000442978 646 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AL022237.1-201ENST00000446663 358 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 RPL10P17-201ENST00000453852 316 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 MTCO3P16-201ENST00000454456 754 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC103563.5-201ENST00000455643 364 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AL133445.1-201ENST00000467051 452 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC008629.2-201ENST00000503783 483 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 DUTP7-201ENST00000507982 486 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 HNRNPKP5-201ENST00000515300 253 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 SCARNA6.1-201ENST00000516989 238 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 MIR3189-201ENST00000578735 73 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC145423.1-201ENST00000605712 336 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC072039.2-201ENST00000608883 439 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AL445670.1-201ENST00000618889 801 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 AC073348.1-201ENST00000623002 331 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 PARP4P2-201ENST00000446672 3326 ntBASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNPOQ8N3V7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 AC020633.1-201ENST00000468439 2247 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 AC107982.1-201ENST00000507171 1300 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 PWAR1-201ENST00000624188 2414 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 OR10R3P-201ENST00000361688 942 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 RN7SKP124-201ENST00000364730 341 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 SNORD116-23-201ENST00000384645 92 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 RNU6-1151P-201ENST00000384684 107 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 GAPDHP42-201ENST00000406848 981 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 RNU4-34P-201ENST00000410431 124 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 MORF4L1P6-201ENST00000418771 268 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 MTCO3P1-205ENST00000422088 832 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 RPL31P54-201ENST00000429803 370 ntBASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNPOQ8N3V7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms