Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AL359922.2-201ENST00000581788 3017 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RN7SKP47-201ENST00000365347 328 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC117470.1-201ENST00000381974 330 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 Y_RNA.527-201ENST00000384573 102 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RNA5SP474-201ENST00000391234 90 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 MIR1282-201ENST00000408865 101 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC004690.1-201ENST00000418216 328 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 ELOCP4-201ENST00000420090 333 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 OR5W1P-201ENST00000423705 938 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 GAPDHP57-201ENST00000424400 585 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RPL36AP53-201ENST00000432891 316 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 COL11A2P1-205ENST00000441798 676 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AL137792.2-201ENST00000443484 235 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 SNRPBP1-201ENST00000443634 282 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 PFN1P11-201ENST00000445829 389 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC005002.1-201ENST00000447458 540 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AL590365.1-201ENST00000450788 243 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AL139156.3-201ENST00000454802 394 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RN7SL413P-201ENST00000482700 297 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RNA5SP401-201ENST00000515920 127 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RANP9-201ENST00000519957 271 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 OR6M2P-201ENST00000529831 871 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 RN7SL230P-201ENST00000580835 303 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC011816.2-201ENST00000607089 556 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AC103710.4-201ENST00000609301 899 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 MIR8089-201ENST00000620165 82 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 AL354702.2-202ENST00000641481 890 ntBASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS3Q8IXF0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 AL359396.1-201ENST00000623151 2376 ntBASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.09□□□□□ -1.28
NPAS3Q8IXF0 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 RNA5SP321-201ENST00000362722 111 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 Y_RNA.97-201ENST00000363094 102 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 Y_RNA.574-201ENST00000384766 95 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms