Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC078880.4-201ENST00000617627 1749 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC009831.5-201ENST00000624000 3189 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 RNA5SP350-201ENST00000363298 111 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 MRPS6P2-201ENST00000381143 370 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 U3.52-201ENST00000384034 216 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 Y_RNA.431-201ENST00000384086 102 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 RNU6-463P-201ENST00000384340 107 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 FCF1P2-201ENST00000415284 583 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 RPL7AP51-201ENST00000422016 760 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC018630.2-202ENST00000422992 927 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 USP9YP36-201ENST00000424581 829 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 FAM96AP1-201ENST00000430879 482 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 FGF7P3-201ENST00000454645 303 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AKR1D1P1-201ENST00000457236 936 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 snoU109.1-201ENST00000459339 135 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 H3F3AP5-201ENST00000475267 429 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 NIFKP7-201ENST00000503365 834 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC091965.3-201ENST00000506236 208 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 TRMT10BP1-201ENST00000519377 943 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 OR5AP1P-201ENST00000529730 940 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AL163952.1-202ENST00000569625 600 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 MIR4732-201ENST00000581873 76 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC011712.1-201ENST00000588959 234 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC011497.2-201ENST00000600255 639 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC007363.1-201ENST00000604736 620 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC010680.4-201ENST00000605334 543 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 U1.41-201ENST00000617626 165 ntBASIC5.91□□□□□ -1.46
ATG4DQ86TL0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 CUBNP3-201ENST00000457461 1784 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC012078.1-201ENST00000405035 1646 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC010894.1-201ENST00000313760 361 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 RNU6-878P-201ENST00000384578 110 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 Z97832.1-201ENST00000402490 328 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 RPL10P10-201ENST00000403509 664 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AL356583.2-201ENST00000426536 280 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms