Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC231760.1-201ENST00000498002 260 ntBASIC4.79□□□□□ -1.64
CDH6P55285 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH6P55285 BTG4P1-201ENST00000510421 183 ntBASIC4.79□□□□□ -1.64
CDH6P55285 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH6P55285 OR7H2P-201ENST00000513483 306 ntBASIC4.79□□□□□ -1.64
CDH6P55285 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH6P55285 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH6P55285 AC011270.1-201ENST00000558606 583 ntBASIC4.79□□□□□ -1.64
CDH6P55285 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CDH6P55285 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH6P55285 AC010615.3-201ENST00000597319 394 ntBASIC4.79□□□□□ -1.64
CDH6P55285 AC005086.4-201ENST00000623065 213 ntBASIC4.79□□□□□ -1.64
CDH6P55285 U3.53-201ENST00000628922 216 ntBASIC4.79□□□□□ -1.64
CDH6P55285 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH6P55285 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH6P55285 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH6P55285 AC010928.1-201ENST00000592477 1447 ntBASIC4.79□□□□□ -1.64
CDH6P55285 HSPD1P14-201ENST00000432666 1618 ntBASIC4.79□□□□□ -1.64
CDH6P55285 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CDH6P55285 AC092435.4-201ENST00000623012 4159 ntBASIC4.79□□□□□ -1.64
CDH6P55285 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CDH6P55285 AC108751.5-201ENST00000492880 1336 ntBASIC4.78□□□□□ -1.64
CDH6P55285 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 SCN1A-220ENST00000641603 12506 ntBASIC4.78□□□□□ -1.64
CDH6P55285 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH6P55285 AC012519.1-201ENST00000424588 610 ntBASIC4.78□□□□□ -1.64
CDH6P55285 OR6C71P-201ENST00000432580 913 ntBASIC4.78□□□□□ -1.64
CDH6P55285 PPIAP13-201ENST00000434706 478 ntBASIC4.78□□□□□ -1.64
CDH6P55285 HMGB3P9-201ENST00000441799 583 ntBASIC4.78□□□□□ -1.64
CDH6P55285 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH6P55285 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH6P55285 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH6P55285 CD24P2-201ENST00000565486 219 ntBASIC4.78□□□□□ -1.64
CDH6P55285 AC073091.2-201ENST00000603205 907 ntBASIC4.78□□□□□ -1.64
CDH6P55285 AC008966.2-201ENST00000606157 453 ntBASIC4.78□□□□□ -1.64
CDH6P55285 AL133406.3-201ENST00000606817 541 ntBASIC4.78□□□□□ -1.64
CDH6P55285 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH6P55285 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH6P55285 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH6P55285 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH6P55285 AC108467.2-201ENST00000617640 1597 ntBASIC4.78□□□□□ -1.64
CDH6P55285 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.78□□□□□ -1.65
CDH6P55285 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH6P55285 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH6P55285 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CDH6P55285 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDH6P55285 MT-RNR1-201ENST00000389680 954 ntBASIC4.77□□□□□ -1.65
CDH6P55285 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDH6P55285 AL035419.1-201ENST00000397037 564 ntBASIC4.77□□□□□ -1.65
CDH6P55285 MIR298-201ENST00000401212 88 ntBASIC4.77□□□□□ -1.65
CDH6P55285 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH6P55285 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 AL360081.1-201ENST00000428299 555 ntBASIC4.77□□□□□ -1.65
CDH6P55285 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH6P55285 AC006466.1-201ENST00000438721 289 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH6P55285 PTMAP3-201ENST00000447474 330 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 OR6C72P-201ENST00000451403 892 ntBASIC4.77□□□□□ -1.65
CDH6P55285 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 SCARNA10-201ENST00000459255 330 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AC006967.1-201ENST00000467608 589 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AC105233.1-201ENST00000498840 781 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AK4P6-201ENST00000505168 528 ntBASIC4.77□□□□□ -1.65
CDH6P55285 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 SNORD116-30-201ENST00000516468 85 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AC008147.3-201ENST00000548666 354 ntBASIC4.77□□□□□ -1.65
CDH6P55285 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH6P55285 MIR4480-201ENST00000582492 71 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AC091178.1-203ENST00000584586 279 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH6P55285 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH6P55285 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH6P55285 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH6P55285 AC133552.5-201ENST00000604266 540 ntBASIC4.77□□□□□ -1.65
CDH6P55285 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.77□□□□□ -1.65
CDH6P55285 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms