Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.4□□□□□ -1.38
NID1P14543 AC107953.1-201ENST00000522216 297 ntBASIC6.4□□□□□ -1.38
NID1P14543 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.4□□□□□ -1.38
NID1P14543 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.4□□□□□ -1.38
NID1P14543 PHBP2-201ENST00000532859 806 ntBASIC6.4□□□□□ -1.38
NID1P14543 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NID1P14543 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.4□□□□□ -1.38
NID1P14543 AC068305.2-201ENST00000550567 1205 ntBASIC6.4□□□□□ -1.38
NID1P14543 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.4□□□□□ -1.38
NID1P14543 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.4□□□□□ -1.38
NID1P14543 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.4□□□□□ -1.38
NID1P14543 AC090236.2-201ENST00000587933 1101 ntBASIC6.4□□□□□ -1.38
NID1P14543 CKS1BP3-201ENST00000600888 237 ntBASIC6.4□□□□□ -1.38
NID1P14543 AC122710.3-201ENST00000606566 541 ntBASIC6.4□□□□□ -1.38
NID1P14543 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NID1P14543 AL138693.1-201ENST00000622219 129 ntBASIC6.4□□□□□ -1.38
NID1P14543 AC091925.1-201ENST00000623204 462 ntBASIC6.4□□□□□ -1.38
NID1P14543 AL732618.1-201ENST00000623251 301 ntBASIC6.4□□□□□ -1.38
NID1P14543 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.4□□□□□ -1.38
NID1P14543 AC063952.1-203ENST00000634410 658 ntBASIC6.4□□□□□ -1.38
NID1P14543 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NID1P14543 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NID1P14543 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NID1P14543 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.4□□□□□ -1.39
NID1P14543 AC006378.2-201ENST00000623178 2476 ntBASIC6.4□□□□□ -1.39
NID1P14543 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NID1P14543 AC093297.3-201ENST00000607056 2517 ntBASIC6.4□□□□□ -1.39
NID1P14543 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NID1P14543 AP000473.2-201ENST00000602659 1537 ntBASIC6.4□□□□□ -1.39
NID1P14543 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NID1P14543 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NID1P14543 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.4□□□□□ -1.39
NID1P14543 CDY19P-201ENST00000411668 1613 ntBASIC6.39□□□□□ -1.39
NID1P14543 CDY18P-201ENST00000438294 1609 ntBASIC6.39□□□□□ -1.39
NID1P14543 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
NID1P14543 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 AC127070.3-201ENST00000503695 3263 ntBASIC6.39□□□□□ -1.39
NID1P14543 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 AC061975.7-201ENST00000592016 2692 ntBASIC6.39□□□□□ -1.39
NID1P14543 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 RNU6-216P-201ENST00000363282 104 ntBASIC6.39□□□□□ -1.39
NID1P14543 RNU6-282P-201ENST00000365357 103 ntBASIC6.39□□□□□ -1.39
NID1P14543 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 RNU6-505P-201ENST00000384427 107 ntBASIC6.39□□□□□ -1.39
NID1P14543 MIR541-201ENST00000401360 84 ntBASIC6.39□□□□□ -1.39
NID1P14543 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 RPL7P58-201ENST00000402913 758 ntBASIC6.39□□□□□ -1.39
NID1P14543 SNORA11.3-201ENST00000408471 128 ntBASIC6.39□□□□□ -1.39
NID1P14543 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 AL645937.1-202ENST00000421799 937 ntBASIC6.39□□□□□ -1.39
NID1P14543 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NID1P14543 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 IFNA20P-201ENST00000436840 528 ntBASIC6.39□□□□□ -1.39
NID1P14543 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 CECR9-201ENST00000453421 199 ntBASIC6.39□□□□□ -1.39
NID1P14543 GAPDHP53-201ENST00000458397 924 ntBASIC6.39□□□□□ -1.39
NID1P14543 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 MRPS17P3-201ENST00000465453 385 ntBASIC6.39□□□□□ -1.39
NID1P14543 RPSAP48-201ENST00000466509 889 ntBASIC6.39□□□□□ -1.39
NID1P14543 RPL7P39-201ENST00000481157 744 ntBASIC6.39□□□□□ -1.39
NID1P14543 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 AC021220.1-201ENST00000507445 630 ntBASIC6.39□□□□□ -1.39
NID1P14543 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.39□□□□□ -1.39
NID1P14543 AC112206.3-201ENST00000514578 389 ntBASIC6.39□□□□□ -1.39
NID1P14543 RNU6-1261P-201ENST00000517194 104 ntBASIC6.39□□□□□ -1.39
NID1P14543 BTF3P12-201ENST00000519620 469 ntBASIC6.39□□□□□ -1.39
NID1P14543 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 OR5B19P-201ENST00000531766 928 ntBASIC6.39□□□□□ -1.39
NID1P14543 AP002812.4-201ENST00000532139 286 ntBASIC6.39□□□□□ -1.39
NID1P14543 OR5BN1P-201ENST00000532955 829 ntBASIC6.39□□□□□ -1.39
NID1P14543 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.39□□□□□ -1.39
NID1P14543 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 OR5BK1P-201ENST00000550421 823 ntBASIC6.39□□□□□ -1.39
NID1P14543 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.39□□□□□ -1.39
NID1P14543 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NID1P14543 CHEK2P2-201ENST00000554701 672 ntBASIC6.39□□□□□ -1.39
NID1P14543 TRAV15-201ENST00000556680 249 ntBASIC6.39□□□□□ -1.39
NID1P14543 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.39□□□□□ -1.39
NID1P14543 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.39□□□□□ -1.39
NID1P14543 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms