Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC112487.2-201ENST00000637950 304 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 TCP11X1-202ENST00000622971 1372 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PDGFAP04085 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 ZNF402P-201ENST00000404435 3100 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFAP04085 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PDGFAP04085 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 CASC19-221ENST00000641309 1382 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 OR9K1P-201ENST00000326513 941 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PDGFAP04085 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PDGFAP04085 RN7SKP174-201ENST00000363803 330 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RN7SKP130-201ENST00000364924 301 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RNU6-878P-201ENST00000384578 110 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 Y_RNA.548-201ENST00000384656 105 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 AC026310.1-201ENST00000396004 378 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 AL133260.1-201ENST00000405720 405 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RNA5SP155-201ENST00000411154 129 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 AL589872.1-201ENST00000426602 288 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 USP9YP9-201ENST00000429406 715 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
PDGFAP04085 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 HMGB1P4-201ENST00000455362 567 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RPS7P10-201ENST00000464254 603 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 FTH1P8-201ENST00000498161 514 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 EIF3KP3-201ENST00000514461 639 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFAP04085 NANOGNBP2-201ENST00000544753 553 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 AL442663.2-201ENST00000554385 511 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 MIR4310-201ENST00000582950 57 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFAP04085 AC008687.2-201ENST00000597865 520 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.5□□□□□ -1.37
PDGFAP04085 AC087283.1-201ENST00000604029 1074 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 RNU6-87P-201ENST00000607561 108 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 AL732618.1-201ENST00000623251 301 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PDGFAP04085 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 AC127070.3-201ENST00000503695 3263 ntBASIC6.5□□□□□ -1.37
PDGFAP04085 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFAP04085 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PDGFAP04085 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFAP04085 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFAP04085 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFAP04085 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PDGFAP04085 TRIM51GP-201ENST00000534741 1350 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC096921.2-201ENST00000561507 1916 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 RNU1-5P-201ENST00000362684 144 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 Y_RNA.142-201ENST00000363491 102 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 SNORA64.3-201ENST00000365647 134 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 U3.23-201ENST00000391132 200 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL357752.1-201ENST00000412817 349 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 EEF1A1P40-201ENST00000412883 573 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC048351.1-201ENST00000420064 602 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms