Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR4436B1-201ENST00000583272 91 ntBASIC5.13□□□□□ -1.59
O00370 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.13□□□□□ -1.59
O00370 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.13□□□□□ -1.59
O00370 AL133370.2-201ENST00000619934 439 ntBASIC5.13□□□□□ -1.59
O00370 AL445528.2-201ENST00000620582 470 ntBASIC5.13□□□□□ -1.59
O00370 AL672167.1-203ENST00000641299 2975 ntBASIC5.13□□□□□ -1.59
O00370 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
O00370 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
O00370 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
O00370 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
O00370 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
O00370 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
O00370 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.12□□□□□ -1.59
O00370 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 NCSTNP1-201ENST00000406229 144 ntBASIC5.12□□□□□ -1.59
O00370 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 AC114755.2-201ENST00000413520 361 ntBASIC5.12□□□□□ -1.59
O00370 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.12□□□□□ -1.59
O00370 LINC00993-201ENST00000420453 540 ntBASIC5.12□□□□□ -1.59
O00370 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.12□□□□□ -1.59
O00370 CKS1BP6-201ENST00000424932 240 ntBASIC5.12□□□□□ -1.59
O00370 MTATP6P11-201ENST00000428071 670 ntBASIC5.12□□□□□ -1.59
O00370 FHP1-201ENST00000442741 703 ntBASIC5.12□□□□□ -1.59
O00370 RPL31P20-201ENST00000449593 360 ntBASIC5.12□□□□□ -1.59
O00370 AC010733.1-201ENST00000451515 401 ntBASIC5.12□□□□□ -1.59
O00370 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.12□□□□□ -1.59
O00370 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.12□□□□□ -1.59
O00370 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 LARP7P4-201ENST00000481075 878 ntBASIC5.12□□□□□ -1.59
O00370 HAUS1P1-201ENST00000505275 832 ntBASIC5.12□□□□□ -1.59
O00370 PCNAP1-201ENST00000505363 709 ntBASIC5.12□□□□□ -1.59
O00370 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.12□□□□□ -1.59
O00370 RNU6-760P-201ENST00000516078 97 ntBASIC5.12□□□□□ -1.59
O00370 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.12□□□□□ -1.59
O00370 BUD31P1-201ENST00000521828 359 ntBASIC5.12□□□□□ -1.59
O00370 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.12□□□□□ -1.59
O00370 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.12□□□□□ -1.59
O00370 OR10D4P-201ENST00000525892 951 ntBASIC5.12□□□□□ -1.59
O00370 OR8X1P-201ENST00000534542 869 ntBASIC5.12□□□□□ -1.59
O00370 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.12□□□□□ -1.59
O00370 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.12□□□□□ -1.59
O00370 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.12□□□□□ -1.59
O00370 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 RN7SL802P-201ENST00000577858 299 ntBASIC5.12□□□□□ -1.59
O00370 AC092474.3-201ENST00000603022 568 ntBASIC5.12□□□□□ -1.59
O00370 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.12□□□□□ -1.59
O00370 AC084036.1-201ENST00000609190 508 ntBASIC5.12□□□□□ -1.59
O00370 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 AC006453.5-201ENST00000636451 619 ntBASIC5.12□□□□□ -1.59
O00370 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.12□□□□□ -1.59
O00370 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
O00370 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
O00370 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
O00370 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
O00370 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.11□□□□□ -1.59
O00370 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.11□□□□□ -1.59
O00370 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
O00370 SCN1A-220ENST00000641603 12506 ntBASIC5.11□□□□□ -1.59
O00370 TLK1P1-201ENST00000456760 2440 ntBASIC5.11□□□□□ -1.59
O00370 MAPK10-349ENST00000641767 3661 ntBASIC5.11□□□□□ -1.59
O00370 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.11□□□□□ -1.59
O00370 RNA5SP191-201ENST00000362585 102 ntBASIC5.11□□□□□ -1.59
O00370 MIR550A3-201ENST00000390735 95 ntBASIC5.11□□□□□ -1.59
O00370 AL034403.1-201ENST00000399414 885 ntBASIC5.11□□□□□ -1.59
O00370 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.11□□□□□ -1.59
O00370 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.11□□□□□ -1.59
O00370 AC004074.1-201ENST00000421810 1063 ntBASIC5.11□□□□□ -1.59
O00370 CR848007.2-201ENST00000424918 787 ntBASIC5.11□□□□□ -1.59
O00370 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 RPS17P8-201ENST00000434525 335 ntBASIC5.11□□□□□ -1.59
O00370 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 SBDSP1-204ENST00000453858 737 ntBASIC5.11□□□□□ -1.59
O00370 RPS3AP53-201ENST00000454716 778 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms