Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC009948.5-201ENST00000624360 4406 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 RNU5F-6P-201ENST00000362979 116 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 RNA5SP394-201ENST00000364216 119 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HMGB1P20-201ENST00000402555 677 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC109780.2-201ENST00000413467 845 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 MTND4LP17-201ENST00000414607 293 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC009237.2-201ENST00000421358 284 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL590762.4-201ENST00000425885 253 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL596276.1-201ENST00000434465 418 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 B3GNT2P1-201ENST00000434960 952 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 EEF1B2P6-201ENST00000445713 673 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HMGN3P1-201ENST00000453847 193 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 RN7SL870P-201ENST00000460111 296 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 RPL31P58-201ENST00000469001 379 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC013828.1-201ENST00000481845 158 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 OR4G11P-201ENST00000492842 939 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC026826.1-201ENST00000493002 361 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HIGD1AP14-201ENST00000507617 282 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 RNU6-488P-201ENST00000515918 99 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC068587.4-201ENST00000533893 186 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HMGN2P6-201ENST00000551091 273 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HSPE1P2-201ENST00000554777 306 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 MIR548AB-201ENST00000584917 84 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC097467.4-201ENST00000605504 141 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AL445222.1-201ENST00000607259 628 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AP000648.2-201ENST00000624182 404 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AP000550.3-201ENST00000637734 379 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 MAPK10-377ENST00000642006 2752 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 AC016251.2-201ENST00000623393 3089 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 SELENOWP1-201ENST00000322792 252 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 RPS3AP23-201ENST00000401762 784 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 MTCYBP36-201ENST00000404146 440 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 HMGN1P14-201ENST00000412459 517 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 AL662874.1-201ENST00000426065 230 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 UBE2V1P8-201ENST00000437166 265 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 EEF1E1P1-201ENST00000446998 430 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 snoU109.1-201ENST00000459339 135 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 SNORD42A-201ENST00000459584 64 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 RPL35AP28-201ENST00000459730 331 ntBASIC7.25□□□□□ -1.25
TMEM88BA6NKF7 AC021678.1-201ENST00000505195 936 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms