Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 AC026402.1-201ENST00000513642 170 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 AP005262.1-201ENST00000582646 997 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RPL12P25-202ENST00000598100 674 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 AC020910.2-201ENST00000603635 610 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 RPL32P3-201ENST00000359025 275 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC234779.1-201ENST00000425910 285 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 RPL12P28-201ENST00000430852 489 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AL161722.1-201ENST00000446972 1032 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 MTND2P28-201ENST00000457540 1044 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 RPL7AP10-201ENST00000481016 791 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC107068.1-201ENST00000563286 4218 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC140479.3-201ENST00000418944 1126 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 C4BPAP2-201ENST00000428434 478 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC023141.6-201ENST00000429418 337 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AP002981.1-201ENST00000517692 975 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 TRAV8-5-201ENST00000537369 341 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 AC073091.2-201ENST00000603205 907 ntBASIC4.34□□□□□ -1.71
CCDC88CQ9P219 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC88CQ9P219 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC88CQ9P219 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.72
CCDC88CQ9P219 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC88CQ9P219 OR14L1P-202ENST00000641545 3009 ntBASIC4.34□□□□□ -1.72
CCDC88CQ9P219 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC88CQ9P219 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RAD17P1-201ENST00000418130 2042 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC120338.1-201ENST00000625074 1541 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 COX6CP17-201ENST00000421389 185 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 NFYAP1-201ENST00000431953 972 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RPEP2-201ENST00000432149 701 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RPL23AP43-201ENST00000446445 471 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AL591623.2-201ENST00000449978 222 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC093267.1-201ENST00000489176 961 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 VN2R3P-201ENST00000422626 1412 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RNA5SP397-201ENST00000391323 118 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RPL21P43-201ENST00000425440 472 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RSL24D1P6-201ENST00000426934 401 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC004975.1-201ENST00000428733 208 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC004938.1-201ENST00000438468 308 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RPL7P32-201ENST00000457119 744 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 CYCSP28-201ENST00000534284 321 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms