Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.73□□□□□ -1.65
HTTP42858 AL451050.1-201ENST00000450126 415 ntBASIC4.73□□□□□ -1.65
HTTP42858 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.73□□□□□ -1.65
HTTP42858 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.73□□□□□ -1.65
HTTP42858 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC4.73□□□□□ -1.65
HTTP42858 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.73□□□□□ -1.65
HTTP42858 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HTTP42858 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.72□□□□□ -1.65
HTTP42858 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.72□□□□□ -1.65
HTTP42858 AL592436.1-201ENST00000605135 558 ntBASIC4.72□□□□□ -1.65
HTTP42858 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.72□□□□□ -1.65
HTTP42858 AC073136.1-201ENST00000449426 2884 ntBASIC4.72□□□□□ -1.65
HTTP42858 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.72□□□□□ -1.65
HTTP42858 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.72□□□□□ -1.65
HTTP42858 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.72□□□□□ -1.65
HTTP42858 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.72□□□□□ -1.65
HTTP42858 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HTTP42858 RNU1-20P-201ENST00000363314 162 ntBASIC4.72□□□□□ -1.65
HTTP42858 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HTTP42858 MIR30B-201ENST00000384850 88 ntBASIC4.72□□□□□ -1.65
HTTP42858 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.72□□□□□ -1.65
HTTP42858 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.72□□□□□ -1.65
HTTP42858 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.72□□□□□ -1.65
HTTP42858 AL133244.1-201ENST00000456007 258 ntBASIC4.72□□□□□ -1.65
HTTP42858 AC105031.1-201ENST00000518550 476 ntBASIC4.72□□□□□ -1.65
HTTP42858 AC079880.2-201ENST00000603790 1213 ntBASIC4.72□□□□□ -1.65
HTTP42858 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.72□□□□□ -1.65
HTTP42858 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 AC021242.1-201ENST00000507315 2035 ntBASIC4.72□□□□□ -1.65
HTTP42858 AC100778.3-201ENST00000580060 1750 ntBASIC4.72□□□□□ -1.65
HTTP42858 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 FCF1P5-201ENST00000406490 482 ntBASIC4.72□□□□□ -1.65
HTTP42858 USP9YP4-201ENST00000424401 1745 ntBASIC4.72□□□□□ -1.65
HTTP42858 SERPINA7P1-201ENST00000443077 631 ntBASIC4.72□□□□□ -1.65
HTTP42858 RPL35AP15-201ENST00000468042 339 ntBASIC4.72□□□□□ -1.65
HTTP42858 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.72□□□□□ -1.65
HTTP42858 AC024224.1-201ENST00000538284 609 ntBASIC4.72□□□□□ -1.65
HTTP42858 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.72□□□□□ -1.65
HTTP42858 AC037471.2-201ENST00000564941 598 ntBASIC4.72□□□□□ -1.65
HTTP42858 MIMT1-201ENST00000597105 1050 ntBASIC4.72□□□□□ -1.65
HTTP42858 AL031985.2-201ENST00000600955 480 ntBASIC4.72□□□□□ -1.65
HTTP42858 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.72□□□□□ -1.65
HTTP42858 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HTTP42858 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC4.71□□□□□ -1.65
HTTP42858 RNA5SP22-201ENST00000365393 109 ntBASIC4.71□□□□□ -1.66
HTTP42858 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.71□□□□□ -1.66
HTTP42858 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.71□□□□□ -1.66
HTTP42858 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.71□□□□□ -1.66
HTTP42858 PRELID3BP6-201ENST00000503839 571 ntBASIC4.71□□□□□ -1.66
HTTP42858 RNU1-95P-201ENST00000516357 160 ntBASIC4.71□□□□□ -1.66
HTTP42858 RNU1-128P-201ENST00000516704 160 ntBASIC4.71□□□□□ -1.66
HTTP42858 AC006064.5-201ENST00000541782 248 ntBASIC4.71□□□□□ -1.66
HTTP42858 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HTTP42858 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.71□□□□□ -1.66
HTTP42858 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.71□□□□□ -1.66
HTTP42858 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.71□□□□□ -1.66
HTTP42858 OR4K6P-201ENST00000416478 897 ntBASIC4.71□□□□□ -1.66
HTTP42858 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.71□□□□□ -1.66
HTTP42858 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.71□□□□□ -1.66
HTTP42858 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.71□□□□□ -1.66
HTTP42858 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.71□□□□□ -1.66
HTTP42858 AC115621.1-201ENST00000604653 858 ntBASIC4.71□□□□□ -1.66
HTTP42858 AC016957.2-201ENST00000616998 848 ntBASIC4.71□□□□□ -1.66
HTTP42858 DDX18P5-201ENST00000534547 1306 ntBASIC4.71□□□□□ -1.66
HTTP42858 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HTTP42858 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HTTP42858 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HTTP42858 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.71□□□□□ -1.66
HTTP42858 OR6C71P-201ENST00000432580 913 ntBASIC4.7□□□□□ -1.66
HTTP42858 RPL35AP21-201ENST00000437667 333 ntBASIC4.7□□□□□ -1.66
HTTP42858 AC110792.1-201ENST00000491826 472 ntBASIC4.7□□□□□ -1.66
HTTP42858 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.7□□□□□ -1.66
HTTP42858 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.7□□□□□ -1.66
HTTP42858 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.7□□□□□ -1.66
HTTP42858 AC011816.2-201ENST00000607089 556 ntBASIC4.7□□□□□ -1.66
HTTP42858 AP001002.2-201ENST00000625137 386 ntBASIC4.7□□□□□ -1.66
HTTP42858 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.7□□□□□ -1.66
HTTP42858 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HTTP42858 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HTTP42858 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC4.7□□□□□ -1.66
HTTP42858 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms