Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOBEC1P41238 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
APOBEC1P41238 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
APOBEC1P41238 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.69□□□□□ -1.66
APOBEC1P41238 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
APOBEC1P41238 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.69□□□□□ -1.66
APOBEC1P41238 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
APOBEC1P41238 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 OR9K1P-201ENST00000326513 941 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
APOBEC1P41238 RN7SKP113-201ENST00000363891 295 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 RN7SKP269-201ENST00000365545 319 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 RNU6-932P-201ENST00000391108 106 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 DNAJC19P6-201ENST00000401853 280 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 RPL21P67-201ENST00000402896 478 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC013404.1-201ENST00000413068 249 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 TCEA1P4-201ENST00000415066 844 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.68□□□□□ -1.66
APOBEC1P41238 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 FTH1P16-201ENST00000435241 552 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.68□□□□□ -1.66
APOBEC1P41238 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC108161.1-201ENST00000461060 402 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC009127.1-201ENST00000467090 155 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC104687.1-201ENST00000485829 412 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC096571.1-202ENST00000506634 735 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC147055.3-201ENST00000510547 851 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 MTND2P32-201ENST00000521584 1038 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 HMGB1P1-201ENST00000522557 636 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC018442.3-201ENST00000523025 183 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 LSM3P2-201ENST00000551246 273 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC006349.1-201ENST00000555526 235 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.68□□□□□ -1.66
APOBEC1P41238 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 SUMO2P15-201ENST00000604285 278 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC090525.3-201ENST00000605601 189 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC063944.3-201ENST00000609969 533 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 MIR6862-1-201ENST00000613016 70 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 MIR6862-2-201ENST00000614755 70 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 CYCSP41-201ENST00000616920 296 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC090506.2-201ENST00000624521 419 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 AC104623.2-202ENST00000623477 4002 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 AC235565.1-201ENST00000456962 1325 ntBASIC4.68□□□□□ -1.66
APOBEC1P41238 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.68□□□□□ -1.66
APOBEC1P41238 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.68□□□□□ -1.66
APOBEC1P41238 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOBEC1P41238 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
APOBEC1P41238 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.67□□□□□ -1.66
APOBEC1P41238 PANDAR-201ENST00000629595 1506 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.67□□□□□ -1.66
APOBEC1P41238 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
APOBEC1P41238 AL606537.1-201ENST00000607258 2011 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
APOBEC1P41238 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 U3.2-201ENST00000362981 210 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.67□□□□□ -1.66
APOBEC1P41238 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
APOBEC1P41238 RNU6-225P-201ENST00000384613 103 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
APOBEC1P41238 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
APOBEC1P41238 HMGB3P18-201ENST00000406327 590 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 DUTP5-201ENST00000406790 469 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
APOBEC1P41238 LINC01881-201ENST00000416103 412 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.67□□□□□ -1.66
APOBEC1P41238 AL121878.1-201ENST00000418638 859 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOBEC1P41238 EI24P4-201ENST00000423683 1078 ntBASIC4.67□□□□□ -1.66
APOBEC1P41238 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.67□□□□□ -1.66
APOBEC1P41238 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.67□□□□□ -1.66
APOBEC1P41238 COX6CP13-201ENST00000428703 226 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms