Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.81□□□□□ -1.48
ATF4P18848 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATF4P18848 GNL2P1-201ENST00000451274 2190 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.81□□□□□ -1.48
ATF4P18848 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 Z95327.2-201ENST00000414579 1873 ntBASIC5.81□□□□□ -1.48
ATF4P18848 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATF4P18848 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 AL049780.3-201ENST00000624612 1583 ntBASIC5.8□□□□□ -1.48
ATF4P18848 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 AL353795.1-201ENST00000439134 1775 ntBASIC5.8□□□□□ -1.48
ATF4P18848 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 AC074141.1-201ENST00000588129 2995 ntBASIC5.8□□□□□ -1.48
ATF4P18848 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 SAGE2P-201ENST00000420011 2126 ntBASIC5.8□□□□□ -1.48
ATF4P18848 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 AL138847.1-201ENST00000258651 546 ntBASIC5.8□□□□□ -1.48
ATF4P18848 Y_RNA.296-201ENST00000364930 108 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATF4P18848 AL512422.1-201ENST00000407033 553 ntBASIC5.8□□□□□ -1.48
ATF4P18848 MIR548F1-201ENST00000408667 84 ntBASIC5.8□□□□□ -1.48
ATF4P18848 IFNA12P-201ENST00000413147 571 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.8□□□□□ -1.48
ATF4P18848 FDPSP6-201ENST00000425091 512 ntBASIC5.8□□□□□ -1.48
ATF4P18848 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 RPS20P1-201ENST00000434853 354 ntBASIC5.8□□□□□ -1.48
ATF4P18848 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 AL031736.1-201ENST00000449688 618 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 SBDSP1-204ENST00000453858 737 ntBASIC5.8□□□□□ -1.48
ATF4P18848 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 RN7SL180P-201ENST00000466769 294 ntBASIC5.8□□□□□ -1.48
ATF4P18848 RN7SL91P-201ENST00000469313 291 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 OR5M14P-201ENST00000506803 618 ntBASIC5.8□□□□□ -1.48
ATF4P18848 TXNP6-201ENST00000510190 310 ntBASIC5.8□□□□□ -1.48
ATF4P18848 RN7SKP14-201ENST00000516000 329 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 CCNG2P1-201ENST00000549521 1000 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 TPRKBP2-201ENST00000565969 475 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AP005119.2-201ENST00000579735 1105 ntBASIC5.8□□□□□ -1.48
ATF4P18848 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 MIR4642-201ENST00000583943 82 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC5.8□□□□□ -1.48
ATF4P18848 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 AC010463.3-201ENST00000594077 500 ntBASIC5.8□□□□□ -1.48
ATF4P18848 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.8□□□□□ -1.48
ATF4P18848 AC016629.2-201ENST00000597341 199 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AL161729.4-201ENST00000604650 476 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AL390208.1-201ENST00000605885 644 ntBASIC5.8□□□□□ -1.48
ATF4P18848 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 AC020910.4-201ENST00000612269 540 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AC090970.3-201ENST00000612566 866 ntBASIC5.8□□□□□ -1.48
ATF4P18848 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 AC015908.5-201ENST00000623289 343 ntBASIC5.8□□□□□ -1.48
ATF4P18848 CR381653.2-201ENST00000624041 768 ntBASIC5.8□□□□□ -1.48
ATF4P18848 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 AC110994.2-201ENST00000635481 492 ntBASIC5.8□□□□□ -1.48
ATF4P18848 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.8□□□□□ -1.48
ATF4P18848 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATF4P18848 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ATF4P18848 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 CCT4P2-201ENST00000233836 1548 ntBASIC5.79□□□□□ -1.48
ATF4P18848 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATF4P18848 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms