Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFRAP16234 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFRAP16234 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 AC009643.2-201ENST00000603543 1448 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC099654.2-201ENST00000433031 1980 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 COX6B1P1-201ENST00000415962 213 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 TBCAP2-201ENST00000416175 326 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 FAR1P1-201ENST00000427163 934 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AC104837.2-201ENST00000427236 424 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 MTND4LP7-201ENST00000431728 294 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 NDUFA5P10-201ENST00000432147 357 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 MTND2P21-201ENST00000436242 1042 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 RPL7P11-201ENST00000437586 658 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC000111.2-201ENST00000448200 210 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 RPS3AP41-201ENST00000462701 778 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC116562.1-201ENST00000485355 781 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AC231760.1-201ENST00000498002 260 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 MTND2P31-201ENST00000512602 616 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AC108120.2-201ENST00000512973 294 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 ENPP7P9-201ENST00000514456 627 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 RNU6-513P-201ENST00000516104 104 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 RNA5SP249-201ENST00000516127 99 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC008033.2-201ENST00000542626 177 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AL355802.4-201ENST00000607635 548 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AP001521.2-201ENST00000608772 546 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AL049539.1-201ENST00000611964 459 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC087385.3-201ENST00000620477 187 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC008758.3-201ENST00000507003 1829 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFRAP16234 SMG1P6-201ENST00000532337 2930 ntBASIC5.13□□□□□ -1.59
PDGFRAP16234 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFRAP16234 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFRAP16234 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFRAP16234 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 CASC19-284ENST00000642142 1868 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 RN7SKP74-201ENST00000362849 309 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 SNORD51.1-201ENST00000365405 77 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFRAP16234 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 XKRY2-201ENST00000442362 1093 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AC112498.1-201ENST00000444401 332 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC243772.1-201ENST00000451620 410 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms