Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL353743.4-201ENST00000422653 1547 ntBASIC5.93□□□□□ -1.46
COL6A2P12110 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.93□□□□□ -1.46
COL6A2P12110 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
COL6A2P12110 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL6A2P12110 EIF3EP1-201ENST00000433978 1316 ntBASIC5.93□□□□□ -1.46
COL6A2P12110 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL6A2P12110 LINC01613-201ENST00000561476 2780 ntBASIC5.93□□□□□ -1.46
COL6A2P12110 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL6A2P12110 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL6A2P12110 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL6A2P12110 AC125336.1-201ENST00000508893 2827 ntBASIC5.93□□□□□ -1.46
COL6A2P12110 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL6A2P12110 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
COL6A2P12110 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.93□□□□□ -1.46
COL6A2P12110 AL354854.1-201ENST00000455940 1363 ntBASIC5.93□□□□□ -1.46
COL6A2P12110 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COL6A2P12110 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC009962.1-201ENST00000567327 3813 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 ADAM24P-201ENST00000398655 2101 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 Y_RNA.6-201ENST00000362350 114 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 RNA5SP279-201ENST00000365513 117 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 DEFB108C-201ENST00000400154 252 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AL034374.1-201ENST00000406329 351 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL6A2P12110 RN7SKP142-201ENST00000411236 328 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 PGBD4P8-201ENST00000412993 562 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 SEPT7P5-201ENST00000434048 306 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 TRIM60P16-201ENST00000444048 694 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC092601.1-201ENST00000444526 383 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 CDC27P1-201ENST00000445384 715 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 RPL31P44-201ENST00000447680 377 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 RPS18P1-201ENST00000447840 458 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 KF459542.1-201ENST00000450908 553 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 DDX39BP2-208ENST00000453923 258 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 RPL5P32-201ENST00000454085 879 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 MTCO3P11-201ENST00000455103 774 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 SUMO2P2-201ENST00000456482 255 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 RPL7P48-201ENST00000461513 746 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AL603882.1-201ENST00000463059 681 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 AC044810.1-201ENST00000480271 711 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 RN7SL741P-201ENST00000482473 289 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 RNU6-1225P-201ENST00000516336 65 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 CDC42P3-201ENST00000518493 633 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 PCNPP1-201ENST00000552501 511 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 POLR2KP1-201ENST00000553226 168 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC012435.1-202ENST00000568772 240 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.92□□□□□ -1.46
COL6A2P12110 MIR3157-201ENST00000578688 85 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC008507.1-201ENST00000587506 734 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC087683.1-201ENST00000591187 441 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AP002884.5-201ENST00000595053 1132 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC022146.1-201ENST00000595307 847 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
COL6A2P12110 AL390838.2-201ENST00000602394 274 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC112220.3-201ENST00000605502 502 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL6A2P12110 RNA5SP439-201ENST00000617595 124 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 AC109315.1-201ENST00000584143 1347 ntBASIC5.92□□□□□ -1.46
COL6A2P12110 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.92□□□□□ -1.46
COL6A2P12110 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL6A2P12110 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms