Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 IGKV3D-34-201ENST00000522638 302 ntBASIC9.26□□□□□ -0.93
PHF8Q9UPP1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 MIR544B-201ENST00000582372 78 ntBASIC9.26□□□□□ -0.93
PHF8Q9UPP1 TPMTP1-201ENST00000592307 737 ntBASIC9.26□□□□□ -0.93
PHF8Q9UPP1 XIST-210ENST00000602863 775 ntTSL 3 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 AC078899.5-201ENST00000612475 178 ntBASIC9.26□□□□□ -0.93
PHF8Q9UPP1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 AC092447.10-201ENST00000620607 1652 ntBASIC9.26□□□□□ -0.93
PHF8Q9UPP1 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC9.26□□□□□ -0.93
PHF8Q9UPP1 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CA10-204ENST00000570565 2276 ntTSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC068733.2-201ENST00000605434 1418 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 OR11H4-201ENST00000315409 1082 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 Y_RNA.149-201ENST00000363558 117 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC087752.1-201ENST00000391360 558 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AL592114.1-201ENST00000403842 483 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RPSAP65-201ENST00000429660 595 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RPS29P14-201ENST00000431518 171 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AL162395.1-201ENST00000457882 422 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RPL24-206ENST00000495401 478 ntTSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CDH12P2-201ENST00000504393 298 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 GAPDHP56-201ENST00000506031 988 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 HMGB3P15-201ENST00000507326 574 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RNU4-49P-201ENST00000516080 140 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 COX6B1P4-201ENST00000519826 484 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC068305.2-201ENST00000550567 1205 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 SNRPGP18-201ENST00000553000 214 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 RN7SL366P-201ENST00000577957 292 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC021646.1-201ENST00000605469 484 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 OR1N1-202ENST00000619659 939 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 ARHGAP42P5-201ENST00000548856 2936 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC096992.2-201ENST00000609553 1684 ntBASIC9.25□□□□□ -0.93
PHF8Q9UPP1 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PHF8Q9UPP1 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
PHF8Q9UPP1 Y_RNA.25-201ENST00000362528 102 ntBASIC9.24□□□□□ -0.93
PHF8Q9UPP1 Y_RNA.28-201ENST00000362554 111 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms