Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 RNU6-764P-201ENST00000516396 105 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC027544.3-201ENST00000535082 757 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 POLR2KP1-201ENST00000553226 168 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC093519.1-201ENST00000566109 298 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 SIGLEC31P-201ENST00000594237 551 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC011468.4-201ENST00000603942 409 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AL355333.1-201ENST00000605632 279 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC012510.1-201ENST00000607946 759 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AC243725.1-201ENST00000637164 436 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 OR2L1P-202ENST00000641567 1023 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 OR7E161P-202ENST00000641994 1033 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 AL162171.3-201ENST00000617439 3178 ntBASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCUBE3Q8IX30 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 CDY11P-201ENST00000447168 1651 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC090337.1-201ENST00000579651 2074 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 Y_RNA.255-201ENST00000364581 97 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 RNA5SP105-201ENST00000391123 113 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC127526.1-201ENST00000417526 366 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC092634.6-201ENST00000418558 192 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 UBE2V1P5-201ENST00000440070 405 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC005165.2-201ENST00000466070 380 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 TUBBP11-201ENST00000472255 252 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 OR9A1P-202ENST00000484361 945 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 RN7SL775P-201ENST00000498361 336 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 SUMO2P7-201ENST00000511179 285 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC027801.3-201ENST00000515049 698 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 PTP4A1P6-201ENST00000531034 478 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AL389895.1-201ENST00000554127 252 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC011193.2-201ENST00000582638 367 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC243773.3-201ENST00000613270 256 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC083806.3-201ENST00000614016 455 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AL138693.1-201ENST00000622219 129 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 CAP1P2-201ENST00000417455 1409 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC006020.1-201ENST00000420179 1854 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 AC007485.2-201ENST00000623493 1667 ntBASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.57□□□□□ -1.2
SCUBE3Q8IX30 KARSP2-201ENST00000415696 1639 ntBASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 MTND5P27-201ENST00000428871 1720 ntBASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 AL023806.3-201ENST00000638502 2704 ntBASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.56□□□□□ -1.2
SCUBE3Q8IX30 SNRPEP3-201ENST00000338402 276 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms