Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RN7SKP122-201ENST00000515923 296 ntBASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 SS18L2P2-201ENST00000583960 235 ntBASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 AL356218.2-201ENST00000605264 187 ntBASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 PCAT14-202ENST00000627127 3935 ntBASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 AC025574.1-201ENST00000554784 1653 ntBASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM1Q2M3G4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 OR14L1P-202ENST00000641545 3009 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 BMS1P3-201ENST00000372011 932 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 RPL7P57-201ENST00000423238 740 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 RPL12P34-201ENST00000424532 479 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AL451139.1-201ENST00000434718 346 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 NPM1P33-201ENST00000438918 872 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 YWHAZP2-201ENST00000440317 728 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 FHP1-201ENST00000442741 703 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC022431.1-201ENST00000450941 438 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 NUTF2P7-201ENST00000453086 375 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC011276.1-201ENST00000469688 323 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 RPL21P126-201ENST00000470049 478 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 NIP7P2-201ENST00000485801 544 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 IGBP1P5-201ENST00000507524 1000 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 HNRNPRP2-201ENST00000528421 743 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC069366.1-201ENST00000583159 838 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC115286.1-201ENST00000604298 434 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC067838.1-201ENST00000606064 577 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AL135786.2-201ENST00000608422 615 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 U3.53-201ENST00000628922 216 ntBASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHROOM1Q2M3G4 AC108751.5-201ENST00000492880 1336 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AL356317.1-201ENST00000396110 1436 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC120338.1-201ENST00000625074 1541 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC096644.3-201ENST00000416788 338 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 GAPDHP49-201ENST00000421421 961 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 HSPE1P16-201ENST00000426640 348 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 NFYAP1-201ENST00000431953 972 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 SEPT14P1-201ENST00000458703 648 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 RN7SL809P-201ENST00000482040 297 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 NPM1P52-201ENST00000518264 846 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC087477.6-201ENST00000559595 843 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC234775.3-201ENST00000564612 656 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.48□□□□□ -1.53
SHROOM1Q2M3G4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM1Q2M3G4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms