Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 VN1R92P-201ENST00000598511 928 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC009237.13-201ENST00000603193 276 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AL683813.2-201ENST00000605245 502 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC006270.3-201ENST00000605967 1036 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC008945.2-201ENST00000606056 604 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC022467.1-201ENST00000614738 749 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 U4.5-201ENST00000617137 123 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AL445670.1-201ENST00000618889 801 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC005840.5-201ENST00000619166 599 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC010435.1-201ENST00000623353 1177 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.18□□□□□ -1.42
EPHB3P54753 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 AC005034.3-201ENST00000604845 1747 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
EPHB3P54753 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 AC130360.2-201ENST00000533477 1556 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC062029.1-202ENST00000606164 3651 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 OFD1P17-201ENST00000437639 3018 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 AL355377.1-201ENST00000621125 1653 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 NXF4-202ENST00000416098 1465 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.17□□□□□ -1.42
EPHB3P54753 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
EPHB3P54753 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
EPHB3P54753 RNU4-21P-201ENST00000362802 126 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 RNU6-1331P-201ENST00000363658 106 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 Y_RNA.408-201ENST00000383987 102 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
EPHB3P54753 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
EPHB3P54753 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 RNU6-757P-201ENST00000410334 100 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 RNU2-66P-201ENST00000410650 161 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.17□□□□□ -1.42
EPHB3P54753 OR6K4P-201ENST00000423179 955 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC010975.2-201ENST00000427781 588 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 HMGB3P24-201ENST00000433260 622 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AL663074.2-201ENST00000440621 479 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.17□□□□□ -1.42
EPHB3P54753 AC003071.1-201ENST00000451219 789 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.17□□□□□ -1.42
EPHB3P54753 PFN1P6-201ENST00000476786 399 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC022215.1-201ENST00000481770 362 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 PDCL3P4-201ENST00000489621 720 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC021087.2-201ENST00000504656 1203 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.17□□□□□ -1.42
EPHB3P54753 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 AC106038.2-201ENST00000520706 568 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 MED28P5-201ENST00000528254 438 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.17□□□□□ -1.42
EPHB3P54753 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 AC007225.2-201ENST00000562529 256 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC116553.2-201ENST00000564203 463 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.17□□□□□ -1.42
EPHB3P54753 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.17□□□□□ -1.42
EPHB3P54753 FO393422.1-201ENST00000603908 708 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AC092954.2-201ENST00000609103 430 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 AL356321.1-201ENST00000621360 228 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
EPHB3P54753 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
EPHB3P54753 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
EPHB3P54753 AL731532.1-201ENST00000623972 4236 ntBASIC6.17□□□□□ -1.42
EPHB3P54753 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EPHB3P54753 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 OR56B2P-201ENST00000317102 954 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 Y_RNA.192-201ENST00000363977 102 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 RNU6-1011P-201ENST00000384668 107 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms