Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATN1P54259 AC068733.1-202ENST00000531479 2456 ntBASIC8.58□□□□□ -1.04
ATN1P54259 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.58□□□□□ -1.04
ATN1P54259 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATN1P54259 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATN1P54259 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
ATN1P54259 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATN1P54259 CASC19-260ENST00000641828 2001 ntBASIC8.58□□□□□ -1.04
ATN1P54259 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
ATN1P54259 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.58□□□□□ -1.04
ATN1P54259 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATN1P54259 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATN1P54259 HERC2P8-202ENST00000564334 3705 ntBASIC8.57□□□□□ -1.04
ATN1P54259 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 AL049634.1-201ENST00000453770 1720 ntBASIC8.57□□□□□ -1.04
ATN1P54259 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 AL133320.1-201ENST00000621423 2352 ntBASIC8.57□□□□□ -1.04
ATN1P54259 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 GTF2H2B-203ENST00000508065 1432 ntBASIC8.57□□□□□ -1.04
ATN1P54259 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 RNU6-1298P-201ENST00000362456 101 ntBASIC8.57□□□□□ -1.04
ATN1P54259 RNU6-562P-201ENST00000362731 107 ntBASIC8.57□□□□□ -1.04
ATN1P54259 SNORA73B-201ENST00000363217 204 ntBASIC8.57□□□□□ -1.04
ATN1P54259 RNY4P16-201ENST00000364768 94 ntBASIC8.57□□□□□ -1.04
ATN1P54259 U3.14-201ENST00000365363 227 ntBASIC8.57□□□□□ -1.04
ATN1P54259 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 AL603910.2-201ENST00000407268 136 ntBASIC8.57□□□□□ -1.04
ATN1P54259 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC8.57□□□□□ -1.04
ATN1P54259 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.57□□□□□ -1.04
ATN1P54259 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.57□□□□□ -1.04
ATN1P54259 RN7SL688P-201ENST00000471754 275 ntBASIC8.57□□□□□ -1.04
ATN1P54259 SIAH1P1-201ENST00000479411 923 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC009269.1-202ENST00000484381 469 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC025271.1-201ENST00000485045 429 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC022415.1-202ENST00000486612 523 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 AC083829.1-201ENST00000503756 657 ntBASIC8.57□□□□□ -1.04
ATN1P54259 PSMA2P2-201ENST00000504319 686 ntBASIC8.57□□□□□ -1.04
ATN1P54259 RAB9BP1-201ENST00000519581 626 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.57□□□□□ -1.04
ATN1P54259 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC8.57□□□□□ -1.04
ATN1P54259 AC018552.3-201ENST00000567416 561 ntBASIC8.57□□□□□ -1.04
ATN1P54259 CYP4A44P-201ENST00000569984 154 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC8.57□□□□□ -1.04
ATN1P54259 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 AC005899.2-201ENST00000584353 90 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC140658.6-201ENST00000603958 201 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AC006335.3-201ENST00000613408 292 ntBASIC8.57□□□□□ -1.04
ATN1P54259 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ATN1P54259 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 ATP5A1P3-201ENST00000573189 1507 ntBASIC8.57□□□□□ -1.04
ATN1P54259 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
ATN1P54259 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.57□□□□□ -1.04
ATN1P54259 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATN1P54259 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
ATN1P54259 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 AC096921.2-201ENST00000561507 1916 ntBASIC8.56□□□□□ -1.04
ATN1P54259 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.56□□□□□ -1.04
ATN1P54259 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.56□□□□□ -1.04
ATN1P54259 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 RNA5SP260-201ENST00000363849 111 ntBASIC8.56□□□□□ -1.04
ATN1P54259 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
ATN1P54259 AL139327.1-201ENST00000382988 348 ntBASIC8.56□□□□□ -1.04
ATN1P54259 HMGB1P17-201ENST00000403495 628 ntBASIC8.56□□□□□ -1.04
ATN1P54259 FAM183DP-201ENST00000421987 399 ntBASIC8.56□□□□□ -1.04
ATN1P54259 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.56□□□□□ -1.04
ATN1P54259 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 AC004801.2-202ENST00000463559 283 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms