Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 AC105233.3-201ENST00000531125 744 ntBASIC5.73□□□□□ -1.49
RGPD3A6NKT7 AC027216.1-201ENST00000577726 685 ntBASIC5.73□□□□□ -1.49
RGPD3A6NKT7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 SNORA51-201ENST00000606420 132 ntBASIC5.73□□□□□ -1.49
RGPD3A6NKT7 RNA5SP439-201ENST00000617595 124 ntBASIC5.73□□□□□ -1.49
RGPD3A6NKT7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 AC140134.1-201ENST00000511830 3544 ntBASIC5.73□□□□□ -1.49
RGPD3A6NKT7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.73□□□□□ -1.49
RGPD3A6NKT7 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AL139095.3-201ENST00000419672 1203 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AL691449.1-201ENST00000426570 421 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 ISCUP1-201ENST00000454451 448 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 RN7SKP157-201ENST00000516174 282 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC016559.2-201ENST00000510759 359 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AP000619.3-201ENST00000535634 1127 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AL031658.2-201ENST00000616850 651 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC005899.7-201ENST00000618199 588 ntBASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RGPD3A6NKT7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
RGPD3A6NKT7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RGPD3A6NKT7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
RGPD3A6NKT7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RGPD3A6NKT7 MIR7-3-201ENST00000384898 110 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 NDUFB4P4-201ENST00000404822 243 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 GOT2P5-201ENST00000433995 546 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 PTMAP3-201ENST00000447474 330 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 OR52E3P-201ENST00000452083 936 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AC110768.1-201ENST00000509222 400 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AL049830.4-201ENST00000555149 351 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 AC090912.3-201ENST00000609775 533 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 OR2L1P-202ENST00000641567 1023 ntBASIC5.71□□□□□ -1.5
RGPD3A6NKT7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RGPD3A6NKT7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC092162.3-201ENST00000624511 1624 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 MIR3065-201ENST00000390137 79 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 MRPS21P3-201ENST00000436696 262 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AL157884.3-201ENST00000448273 1184 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AL935212.3-201ENST00000450729 284 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 RNA5SP246-201ENST00000458909 119 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AK4P6-201ENST00000505168 528 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AL133243.3-201ENST00000617415 3004 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms