Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 PUDPP2-201ENST00000431423 643 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AL161626.1-201ENST00000441480 490 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC006480.1-201ENST00000449887 378 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 FGF7P3-201ENST00000454645 303 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RPL23AP71-201ENST00000470966 469 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC066616.1-201ENST00000486795 413 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RPS3AP50-201ENST00000487064 803 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 MRPL57P6-201ENST00000506570 309 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC027801.3-201ENST00000515049 698 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RNA5SP401-201ENST00000515920 127 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 SCARNA18.2-201ENST00000516882 84 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 ST13P6-201ENST00000522430 1102 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC006116.10-201ENST00000591836 581 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC090948.1-201ENST00000607464 549 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AL118496.1-201ENST00000440201 1812 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC138915.4-201ENST00000565549 4147 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 WDR95P-201ENST00000425638 1542 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC007938.1-201ENST00000562524 2902 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC003973.3-201ENST00000624863 2822 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC110716.2-201ENST00000563865 3945 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 OR2M1P-201ENST00000318104 951 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-223P-201ENST00000362830 107 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-1120P-201ENST00000362988 108 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 Y_RNA.145-201ENST00000363527 102 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-1158P-201ENST00000391167 107 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL136100.1-201ENST00000407696 330 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 MTND3P8-201ENST00000412909 339 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL589794.1-201ENST00000424971 390 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC104698.1-201ENST00000435671 276 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL133351.3-201ENST00000454998 193 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC117395.2-201ENST00000463122 1128 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC090142.1-201ENST00000465776 462 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 MYL6P4-201ENST00000477911 453 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 NACAP6-201ENST00000509572 622 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 PCBP2P3-201ENST00000509726 843 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC034159.1-201ENST00000513885 583 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC112206.3-201ENST00000514578 389 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-201P-201ENST00000517100 61 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC107953.1-201ENST00000522216 297 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 COX6B1P6-201ENST00000522347 255 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AP003084.1-201ENST00000524828 742 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 OR5M2P-201ENST00000529003 936 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL121579.2-201ENST00000555466 590 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC079075.1-201ENST00000559543 878 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SL426P-201ENST00000579106 295 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC022884.3-201ENST00000579571 248 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 RPSAP66-201ENST00000592196 606 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms