Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RNU1-83P-201ENST00000363426 164 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AL590762.2-201ENST00000395798 571 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AL592293.2-201ENST00000422292 996 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC023141.6-201ENST00000429418 337 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC108463.1-201ENST00000450258 347 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC007537.2-201ENST00000472093 511 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC013356.1-201ENST00000489027 564 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC093765.1-201ENST00000603758 881 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AC005191.1-201ENST00000603950 358 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 AL445423.1-201ENST00000609941 536 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 SNORD96B-201ENST00000386148 79 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC012078.1-201ENST00000405035 1646 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 RNA5SP296-201ENST00000410523 111 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC002524.1-201ENST00000411687 547 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AL161747.1-201ENST00000480068 358 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 DEFB109F-201ENST00000491870 277 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 SNORD91B-202ENST00000608459 222 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC139713.2-214ENST00000642059 1811 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AL359922.3-201ENST00000624779 1670 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 RN7SKP267-201ENST00000410381 285 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 UQCRBP1-201ENST00000421129 336 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 RPEP3-201ENST00000425462 676 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 FTLP19-201ENST00000433300 394 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC097523.2-201ENST00000435551 652 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 ARL2BPP10-201ENST00000446487 531 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC104651.2-201ENST00000447549 528 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 RN7SKP46-201ENST00000515942 234 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC015912.2-201ENST00000571053 181 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AL121873.1-201ENST00000616013 524 ntBASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPAP1Q9BWH6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms