Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC108467.2-201ENST00000617640 1597 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 SNORA68.2-201ENST00000391263 128 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 EIF4EP1-201ENST00000422311 642 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 GTF2IP2-201ENST00000424290 697 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC092905.1-201ENST00000467527 949 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 RPSAP50-201ENST00000481955 852 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC006499.3-201ENST00000506077 748 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 PPBPP1-201ENST00000510807 373 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 IGLV3-26-201ENST00000520756 302 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC021006.3-201ENST00000530771 192 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC105129.1-201ENST00000560250 297 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC010201.1-201ENST00000605051 540 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC244517.3-201ENST00000616254 1235 ntBASIC4.88□□□□□ -1.63
CCDC42Q96M95 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC42Q96M95 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC42Q96M95 AC139769.1-204ENST00000472297 1931 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC42Q96M95 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC42Q96M95 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC42Q96M95 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC067945.1-201ENST00000342609 618 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AL121834.1-202ENST00000404494 277 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 VN1R8P-201ENST00000407739 893 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 SNORA79B-201ENST00000410557 148 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 UBTFL3-201ENST00000418934 1024 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 RAD23BP1-201ENST00000421404 1227 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 SKP1P3-201ENST00000429280 487 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 CDY14P-201ENST00000431260 1014 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 CDY12P-201ENST00000440679 1015 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 CDY13P-201ENST00000445813 1015 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 CDY23P-201ENST00000451661 1014 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 RPL7AP28-201ENST00000464513 571 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 UBTFL6-201ENST00000477929 1024 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 OR9N1P-201ENST00000491296 333 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 RNU2-30P-201ENST00000516209 141 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 SCARNA21.2-201ENST00000516600 166 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 RNA5SP34-201ENST00000516887 130 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 BGLT3-201ENST00000564523 994 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC090181.2-201ENST00000602975 672 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 BPIFA4P-203ENST00000603168 689 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC131238.1-201ENST00000617135 328 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 U3.53-201ENST00000628922 216 ntBASIC4.87□□□□□ -1.63
CCDC42Q96M95 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC42Q96M95 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC42Q96M95 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC42Q96M95 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC42Q96M95 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC42Q96M95 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC42Q96M95 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC42Q96M95 AC027290.2-201ENST00000623210 18662 ntBASIC4.86□□□□□ -1.63
CCDC42Q96M95 RNA5SP191-201ENST00000362585 102 ntBASIC4.86□□□□□ -1.63
CCDC42Q96M95 ATP5F1P2-201ENST00000398143 760 ntBASIC4.86□□□□□ -1.63
CCDC42Q96M95 RN7SKP213-201ENST00000410746 298 ntBASIC4.86□□□□□ -1.63
CCDC42Q96M95 AC073335.1-201ENST00000427776 363 ntBASIC4.86□□□□□ -1.63
CCDC42Q96M95 AC016831.4-201ENST00000438302 307 ntBASIC4.86□□□□□ -1.63
CCDC42Q96M95 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC42Q96M95 RNU7-157P-201ENST00000459600 66 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms