Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144CPQ8IYA2 KARSP3-201ENST00000571212 1504 ntBASIC6.76□□□□□ -1.33
CCDC144CPQ8IYA2 VN2R3P-201ENST00000422626 1412 ntBASIC6.76□□□□□ -1.33
CCDC144CPQ8IYA2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC232271.1-201ENST00000602455 2715 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 HMGB1P20-201ENST00000402555 677 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 IFNNP1-201ENST00000429219 553 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC129850.1-201ENST00000436203 508 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC096775.1-201ENST00000437724 448 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AL138787.1-202ENST00000437804 898 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC002504.1-201ENST00000438281 691 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC097499.1-201ENST00000444277 208 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 FRG2FP-204ENST00000453982 852 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 NENFP3-201ENST00000503735 313 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC105233.3-201ENST00000531125 744 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 ACTR3BP3-201ENST00000565577 979 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC095055.1-201ENST00000603472 1113 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC104695.2-201ENST00000605056 775 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC105227.2-201ENST00000615075 605 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC010435.1-201ENST00000623353 1177 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 AC007842.1-201ENST00000597336 2039 ntBASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144CPQ8IYA2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC004076.2-201ENST00000620532 3323 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 GTF2IP4-201ENST00000453092 2054 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 FAM3C2-201ENST00000312214 681 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 SNORA64.1-201ENST00000362600 132 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 RNA5SP394-201ENST00000364216 119 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 Y_RNA.465-201ENST00000384293 102 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 RNU6-549P-201ENST00000384433 107 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AL590084.2-201ENST00000401481 382 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 OR3A2-201ENST00000408891 1076 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 OR5BE1P-201ENST00000425977 939 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 HMGB3P24-201ENST00000433260 622 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 HMGB1P48-201ENST00000446155 598 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AL109741.2-201ENST00000455561 343 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC012123.2-201ENST00000485809 248 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 DUTP1-201ENST00000493631 470 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC105384.2-201ENST00000508433 640 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC108120.2-201ENST00000512973 294 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 SCARNA6.1-201ENST00000516989 238 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC134698.4-201ENST00000523451 826 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AL049870.4-201ENST00000555741 486 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 CYP2C60P-201ENST00000566088 139 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 RN7SKP299-201ENST00000606679 301 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 OR5BE1P-202ENST00000641168 1176 ntBASIC6.74□□□□□ -1.33
CCDC144CPQ8IYA2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms