Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RN7SKP100-201ENST00000411258 284 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 NRBF2P3-201ENST00000432731 865 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 TMX2P1-201ENST00000436507 708 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RPL35AP21-201ENST00000437667 333 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 PTMAP3-201ENST00000447474 330 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL356981.1-201ENST00000454879 684 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RN7SL517P-201ENST00000462240 305 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC073073.1-201ENST00000493920 463 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RN7SKP276-201ENST00000516242 268 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC022726.1-201ENST00000587475 207 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 FAM60CP-201ENST00000591086 664 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC117490.2-201ENST00000610042 594 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL161616.1-201ENST00000611867 286 ntBASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV11-1A0A0K0K1C0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 MAPK10-349ENST00000641767 3661 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC073136.1-201ENST00000449426 2884 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC017079.1-201ENST00000333650 415 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RNU6-178P-201ENST00000384631 104 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RPL34P6-201ENST00000432390 345 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RPS17P8-201ENST00000434525 335 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 C1DP3-201ENST00000455013 423 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RPS5P7-201ENST00000456664 608 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RNA5SP103-201ENST00000459503 118 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC006967.1-201ENST00000467608 589 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 LARP7P4-201ENST00000481075 878 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC007686.1-201ENST00000488511 463 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RN7SL558P-201ENST00000497468 299 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RNU6-709P-201ENST00000517257 104 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CDH12P4-201ENST00000517835 295 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CDH12P3-201ENST00000517935 295 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CDH12P1-201ENST00000518435 295 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 BUD31P1-201ENST00000521828 359 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 SOX5P1-201ENST00000524155 1127 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC087888.1-201ENST00000550884 1254 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 RMST_5.1-201ENST00000618704 126 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AL133370.2-201ENST00000619934 439 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC107027.3-201ENST00000565095 3473 ntBASIC4.47□□□□□ -1.69
TRBV11-1A0A0K0K1C0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRBV11-1A0A0K0K1C0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC110792.3-201ENST00000595906 1614 ntBASIC4.46□□□□□ -1.69
TRBV11-1A0A0K0K1C0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TRBV11-1A0A0K0K1C0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
TRBV11-1A0A0K0K1C0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRBV11-1A0A0K0K1C0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV11-1A0A0K0K1C0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV11-1A0A0K0K1C0 RN7SKP224-201ENST00000364140 325 ntBASIC4.46□□□□□ -1.7
TRBV11-1A0A0K0K1C0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TRBV11-1A0A0K0K1C0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV11-1A0A0K0K1C0 CYB5AP4-201ENST00000396692 399 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms