Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 NCLP2-201ENST00000416078 1462 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 SEPT7P8-201ENST00000413308 775 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 VN1R37P-201ENST00000419096 748 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 RGS17P1-201ENST00000423358 553 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AC133555.2-201ENST00000550213 292 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AL121839.1-201ENST00000556233 1185 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 VN1R81P-201ENST00000602085 372 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AL023583.1-201ENST00000607518 1143 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AC087385.3-201ENST00000620477 187 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 AP001005.3-201ENST00000622049 129 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 CASC19-206ENST00000641028 1430 ntBASIC5.74□□□□□ -1.49
CTNNA3Q9UI47 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AL359922.3-201ENST00000624779 1670 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC008549.2-201ENST00000333482 706 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 U3.30-201ENST00000391308 210 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 U3.35-201ENST00000408405 208 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 CKS1BP6-201ENST00000424932 240 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 TPT1P12-201ENST00000448968 492 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 RN7SL385P-201ENST00000468873 276 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 RNU1-6P-201ENST00000516290 144 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC008147.3-201ENST00000548666 354 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 AC084759.1-201ENST00000561168 290 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 RN7SL802P-201ENST00000577858 299 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 MIR5699-201ENST00000578903 90 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 FAM27B-201ENST00000610601 213 ntBASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA3Q9UI47 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 DHX9P1-201ENST00000436565 3076 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 ZFRP1-201ENST00000457579 2970 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 RNVU1-6-201ENST00000364688 164 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 SNORA62-201ENST00000365493 153 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 VDAC2P1-201ENST00000399358 958 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 RN7SKP199-201ENST00000410325 305 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 RNA5SP113-201ENST00000410486 84 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 AL645608.4-201ENST00000423619 154 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 AC004938.1-201ENST00000438468 308 ntBASIC5.72□□□□□ -1.49
CTNNA3Q9UI47 AL606490.8-201ENST00000441624 319 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms