Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MAPK10-372ENST00000641954 3413 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 MFSD8-242ENST00000641690 4199 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 AC108467.2-201ENST00000617640 1597 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 MIR449B-201ENST00000384995 97 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 YY1P1-201ENST00000427625 668 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 OR8G7P-201ENST00000616658 848 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 AL117339.4-201ENST00000608335 7063 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 AC007159.1-201ENST00000566529 4706 ntBASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.87□□□□□ -1.47
SHANK3Q9BYB0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 MIR331-201ENST00000362302 94 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 RNU6ATAC-201ENST00000408749 126 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AL356276.2-201ENST00000435919 558 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AC128716.1-201ENST00000475129 166 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AP003730.1-201ENST00000524605 285 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 RN7SL600P-201ENST00000581811 299 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AC096577.2-201ENST00000611455 153 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 AP001029.2-203ENST00000589795 4910 ntBASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHANK3Q9BYB0 PDSS1P1-201ENST00000422953 1114 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 BTF3P6-201ENST00000448054 499 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AL133547.1-201ENST00000448546 220 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC006116.5-201ENST00000591936 559 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC007389.2-201ENST00000434630 306 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC091979.2-201ENST00000607514 214 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AP000648.2-201ENST00000624182 404 ntBASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK3Q9BYB0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms