Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AC133555.2-201ENST00000550213 292 ntBASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AC233702.9-201ENST00000581528 203 ntBASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 RPL12P25-202ENST00000598100 674 ntBASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AC006338.2-201ENST00000616864 791 ntBASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 RBPJP2-201ENST00000618187 1444 ntBASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPAP1Q9BWH6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 AL672167.1-205ENST00000641112 3080 ntBASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.71□□□□□ -1.49
RPAP1Q9BWH6 OR13Z1P-201ENST00000416141 834 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 RPL12P34-201ENST00000424532 479 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 NIP7P2-201ENST00000485801 544 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 FKBP1BP1-201ENST00000553366 325 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 MIR4277-201ENST00000578298 84 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AC073091.2-201ENST00000603205 907 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL356218.2-201ENST00000605264 187 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AC015804.1-201ENST00000622935 435 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL121950.1-201ENST00000624993 2077 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 AL022311.1-201ENST00000623726 19416 ntBASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPAP1Q9BWH6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 OR6C64P-201ENST00000419708 825 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 CENPIP1-201ENST00000425713 902 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 RSL24D1P6-201ENST00000426934 401 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 NMNAT1P2-201ENST00000435192 860 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 MTCYBP21-201ENST00000443300 1113 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 MRPL48P1-201ENST00000445390 636 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC091868.1-201ENST00000508746 304 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC068831.8-201ENST00000620171 435 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 MUC2-202ENST00000613187 4845 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 AC112198.2-201ENST00000426589 6996 ntBASIC5.7□□□□□ -1.5
RPAP1Q9BWH6 OR4G1P-202ENST00000641173 1788 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 TRAV35-201ENST00000390462 330 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 RNU4-25P-201ENST00000410569 230 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC010740.1-201ENST00000417035 684 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 NPM1P29-201ENST00000483112 803 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC025164.1-201ENST00000496249 478 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 KATNBL1P4-201ENST00000503545 918 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC025674.1-201ENST00000507074 324 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC087477.6-201ENST00000559595 843 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC008782.1-201ENST00000603386 430 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC011815.3-201ENST00000624194 473 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AL672167.1-203ENST00000641299 2975 ntBASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPAP1Q9BWH6 AL022322.2-201ENST00000624072 20397 ntBASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.68□□□□□ -1.5
RPAP1Q9BWH6 RNU4-39P-201ENST00000362455 127 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms