Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC092162.1-201ENST00000432828 434 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNA1P78396 AC073052.1-201ENST00000440417 714 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNA1P78396 AL161747.1-201ENST00000480068 358 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 RPSAP51-201ENST00000497462 645 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCNA1P78396 AC015795.1-201ENST00000513669 327 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNA1P78396 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNA1P78396 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNA1P78396 AL390334.1-201ENST00000556395 450 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNA1P78396 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNA1P78396 AC005962.2-201ENST00000611427 652 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AP003400.2-201ENST00000624036 666 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AL049536.1-201ENST00000625043 744 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNA1P78396 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCNA1P78396 ZFRP1-201ENST00000457579 2970 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNA1P78396 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CCNA1P78396 AP000542.2-201ENST00000623199 6179 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.46□□□□□ -1.53
CCNA1P78396 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCNA1P78396 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.46□□□□□ -1.53
CCNA1P78396 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCNA1P78396 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCNA1P78396 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNA1P78396 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.46□□□□□ -1.54
CCNA1P78396 FAM3C2-201ENST00000312214 681 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNA1P78396 RPL12P9-201ENST00000412942 488 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 AC140479.3-201ENST00000418944 1126 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNA1P78396 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.46□□□□□ -1.54
CCNA1P78396 AL451139.1-201ENST00000434718 346 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 AL589765.3-201ENST00000446084 462 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 H2AFZP5-201ENST00000446960 382 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNA1P78396 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCNA1P78396 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNA1P78396 FTH1P11-201ENST00000517577 551 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNA1P78396 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNA1P78396 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNA1P78396 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.46□□□□□ -1.54
CCNA1P78396 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNA1P78396 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNA1P78396 AL137072.1-201ENST00000603444 466 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 AC100847.1-201ENST00000611316 481 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 AP005019.3-201ENST00000620418 560 ntBASIC5.46□□□□□ -1.54
CCNA1P78396 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNA1P78396 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.46□□□□□ -1.54
CCNA1P78396 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNA1P78396 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
CCNA1P78396 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNA1P78396 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 AC063976.2-201ENST00000425667 3556 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCNA1P78396 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNA1P78396 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 ZNF137P-201ENST00000456718 1920 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CCNA1P78396 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 RNU1-82P-201ENST00000390851 165 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCNA1P78396 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 AL645608.4-201ENST00000423619 154 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 BX119904.3-201ENST00000428194 957 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNA1P78396 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNA1P78396 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNA1P78396 AL591363.1-201ENST00000450091 483 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNA1P78396 AC026688.1-201ENST00000520639 1168 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNA1P78396 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.45□□□□□ -1.54
CCNA1P78396 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNA1P78396 AC084783.1-201ENST00000565846 910 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCNA1P78396 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNA1P78396 AC073091.2-201ENST00000603205 907 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 OR7A19P-201ENST00000608051 733 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.45□□□□□ -1.54
CCNA1P78396 MIR6716-201ENST00000613413 80 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 AC022960.2-201ENST00000616300 666 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 AC068831.8-201ENST00000620171 435 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 AC004232.3-201ENST00000622977 525 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCNA1P78396 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms