Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AP000926.3-201ENST00000497201 299 ntBASIC4.88□□□□□ -1.63
CDH4P55283 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH4P55283 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH4P55283 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH4P55283 AL110118.1-201ENST00000553543 400 ntBASIC4.88□□□□□ -1.63
CDH4P55283 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDH4P55283 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH4P55283 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH4P55283 AP005901.4-201ENST00000577336 569 ntBASIC4.88□□□□□ -1.63
CDH4P55283 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH4P55283 AC015914.2-201ENST00000618167 288 ntBASIC4.88□□□□□ -1.63
CDH4P55283 AC011815.3-201ENST00000624194 473 ntBASIC4.88□□□□□ -1.63
CDH4P55283 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CDH4P55283 AC025574.1-201ENST00000554784 1653 ntBASIC4.88□□□□□ -1.63
CDH4P55283 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 STX3-208ENST00000641815 3236 ntBASIC4.88□□□□□ -1.63
CDH4P55283 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH4P55283 AL121950.1-201ENST00000624993 2077 ntBASIC4.87□□□□□ -1.63
CDH4P55283 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH4P55283 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH4P55283 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 AC008549.2-201ENST00000333482 706 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AC104297.1-201ENST00000393779 870 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AL590762.2-201ENST00000395798 571 ntBASIC4.87□□□□□ -1.63
CDH4P55283 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 RNU2-50P-201ENST00000410494 143 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH4P55283 NPM1P40-201ENST00000412758 733 ntBASIC4.87□□□□□ -1.63
CDH4P55283 E2F6P2-201ENST00000420708 748 ntBASIC4.87□□□□□ -1.63
CDH4P55283 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH4P55283 AL359265.2-201ENST00000434367 631 ntBASIC4.87□□□□□ -1.63
CDH4P55283 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH4P55283 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH4P55283 AL513533.1-201ENST00000453728 415 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AC079168.2-201ENST00000453977 416 ntBASIC4.87□□□□□ -1.63
CDH4P55283 HSPE1P22-201ENST00000456856 327 ntBASIC4.87□□□□□ -1.63
CDH4P55283 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH4P55283 AC090686.1-201ENST00000481577 749 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH4P55283 RNU2-30P-201ENST00000516209 141 ntBASIC4.87□□□□□ -1.63
CDH4P55283 CDH12P4-201ENST00000517835 295 ntBASIC4.87□□□□□ -1.63
CDH4P55283 CDH12P3-201ENST00000517935 295 ntBASIC4.87□□□□□ -1.63
CDH4P55283 CDH12P1-201ENST00000518435 295 ntBASIC4.87□□□□□ -1.63
CDH4P55283 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH4P55283 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 AC063949.1-201ENST00000552900 865 ntBASIC4.87□□□□□ -1.63
CDH4P55283 FKBP1BP1-201ENST00000553366 325 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH4P55283 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH4P55283 MIR6780A-201ENST00000615089 68 ntBASIC4.87□□□□□ -1.63
CDH4P55283 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH4P55283 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH4P55283 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH4P55283 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH4P55283 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH4P55283 AC083843.3-201ENST00000623679 2186 ntBASIC4.87□□□□□ -1.63
CDH4P55283 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH4P55283 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 AC107068.1-201ENST00000563286 4218 ntBASIC4.86□□□□□ -1.63
CDH4P55283 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 MT-RNR1-201ENST00000389680 954 ntBASIC4.86□□□□□ -1.63
CDH4P55283 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDH4P55283 RN7SKP267-201ENST00000410381 285 ntBASIC4.86□□□□□ -1.63
CDH4P55283 RPL37P18-201ENST00000411602 243 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH4P55283 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH4P55283 AL590139.1-201ENST00000416267 400 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH4P55283 AC004938.1-201ENST00000438468 308 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AL157385.1-201ENST00000446973 268 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH4P55283 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH4P55283 AC007686.1-201ENST00000488511 463 ntBASIC4.86□□□□□ -1.63
CDH4P55283 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CDH4P55283 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH4P55283 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH4P55283 CCNHP1-201ENST00000513311 678 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms